Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5344 |
Symbol | |
ID | 4016303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | - |
Start bp | 105460 |
End bp | 107031 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637944966 |
Product | integrase catalytic subunit |
Protein accession | YP_552098 |
Protein GI | 91791148 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.830623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGTCT TGAAACTGCA TTTGCAAACC ACCATTTGGA CCCTGCTTAA AGCCGGGTCC ACCCAACGCC AGATTGAGCG CGCCACAGGC ATTTCGCGCC ACACGATACC GGCCTACAAG AAGCAGTTCG ACAGTCAGAA CCCTGACACG GCTCGTGATC AGTCCAGCGC GCCAATTCAA ACTGCTCCAC CCTGGCCACC GACTCCATTA CCTGAACCGT TGACCAGCGC ATCCATCTGC GAGCCCTACC GGGACTACGT CGAGGCCCAG TTGCGCCTCA AACGCAACGC CATGGCCATC TACCAGGACC TGGTCGATCA GTTCGGCTTC AAGGGTGCCT ACAACGCCGT CAAGCGCTTT ACCGCCAAGC TGCGCTACCG CGAGCCCGAA CAGTTCGACC GCCTGGAGTT TTCGCCCGGC GAGGAGATGC AGGTCGACTA CGGCGAGGGC GCGCCCACCC GCGTGCTTGG AACCACCCGC TACCGTAAAC CCCGCCTGTT CGTGGCGACC CTGCGCTACT CCCGGCGCAG CTTTCGCCGC GTGGTCTGGA AGTCCAGCCA GGAGACGTGG GCCCGACTGC ATGAGCAGGC ATGGCGCTAC TTCGGTGGGT GTTGCAGATA CGTGGTGCTG GACAACCTGA AGGAAGGCGT GCTCAAGCCC GACATCCACG AGCCCGAGCT CAACCCGGTC TACGCCGCCG CGCTCAAGCA CTACGACGTC GTGGGTGACC CCGCCCGCGT ACGAGATCCG AATCGCAAAG GCACCGTCGA GAACGCCATC GGCCACACCC AGGCGACCGC CCTCAAGGGC CGTCGCTTTG AGACCATCGA AGAGCAAAAC GACTTCCTTG AGCACTGGGA AGTGACCTGG GCCGCCACCC GTATCCACGG CAGTGAGCGC CGCCAAGTAC AGGCCATGTT CGAAGAAGAG AAGCCCCACT TGCAAGCCCT GCCCATCGTG GGCATGCAGT ATTTCACCGA GTCCCAGCGC ACCGTCTACG ACGACACCTG CGTGCGCGTT GACCACAGCA GCTATGCCGC GCGCCCGGCC CCCATTGGCT CCCTTGTTCT GGTGCGCATC TTCGAGCACC GCATCGAGAT TCGTGACCTC CAGTCCAAAT CCCTGCTGCG TACCCACCCC CGCGCCCAGC GCCCAGGATC GGTGATCCTG CCCAATGAGG AGCGCGTCTT CAACCCATCG CGTGAGACCC TGTACATCCT CAACCAGGCC AAGGACATTG GCCCCCAGGC ACATCGGCTG TGCGAGATGC TCTTTGGCAT TGAGGGGCGT GTGGGCCAGC GCAAGCTCTG GGGCATCGTG GGCCTGGGCC GGACCTACCC GCACCGCCTG GTCAACTCCG CATGCGAGCG CGCCCTGAAT GATGGCCTTT ACAGCTACAA GCACGTCAAG GCGCTCACCG AGCGGCTCGT GGCGGACGCC CTGGCCGCCA TCGATTCTTC GCCAGAAACT CCCCCCGCCC AGGCCGAACT GCCCCTGACT CAGGAGCACC ACCTCATCCG AAGCCCTGAT GAGTACGCAG ACCTTTTTGC CCGCTGCAGC GCCCAGTCAT AA
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Protein sequence | MNVLKLHLQT TIWTLLKAGS TQRQIERATG ISRHTIPAYK KQFDSQNPDT ARDQSSAPIQ TAPPWPPTPL PEPLTSASIC EPYRDYVEAQ LRLKRNAMAI YQDLVDQFGF KGAYNAVKRF TAKLRYREPE QFDRLEFSPG EEMQVDYGEG APTRVLGTTR YRKPRLFVAT LRYSRRSFRR VVWKSSQETW ARLHEQAWRY FGGCCRYVVL DNLKEGVLKP DIHEPELNPV YAAALKHYDV VGDPARVRDP NRKGTVENAI GHTQATALKG RRFETIEEQN DFLEHWEVTW AATRIHGSER RQVQAMFEEE KPHLQALPIV GMQYFTESQR TVYDDTCVRV DHSSYAARPA PIGSLVLVRI FEHRIEIRDL QSKSLLRTHP RAQRPGSVIL PNEERVFNPS RETLYILNQA KDIGPQAHRL CEMLFGIEGR VGQRKLWGIV GLGRTYPHRL VNSACERALN DGLYSYKHVK ALTERLVADA LAAIDSSPET PPAQAELPLT QEHHLIRSPD EYADLFARCS AQS
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