Gene Bpro_5344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5344 
Symbol 
ID4016303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007950 
Strand
Start bp105460 
End bp107031 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content63% 
IMG OID637944966 
Productintegrase catalytic subunit 
Protein accessionYP_552098 
Protein GI91791148 
COG category[L] Replication, recombination and repair 
COG ID[COG4584] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.830623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTCT TGAAACTGCA TTTGCAAACC ACCATTTGGA CCCTGCTTAA AGCCGGGTCC 
ACCCAACGCC AGATTGAGCG CGCCACAGGC ATTTCGCGCC ACACGATACC GGCCTACAAG
AAGCAGTTCG ACAGTCAGAA CCCTGACACG GCTCGTGATC AGTCCAGCGC GCCAATTCAA
ACTGCTCCAC CCTGGCCACC GACTCCATTA CCTGAACCGT TGACCAGCGC ATCCATCTGC
GAGCCCTACC GGGACTACGT CGAGGCCCAG TTGCGCCTCA AACGCAACGC CATGGCCATC
TACCAGGACC TGGTCGATCA GTTCGGCTTC AAGGGTGCCT ACAACGCCGT CAAGCGCTTT
ACCGCCAAGC TGCGCTACCG CGAGCCCGAA CAGTTCGACC GCCTGGAGTT TTCGCCCGGC
GAGGAGATGC AGGTCGACTA CGGCGAGGGC GCGCCCACCC GCGTGCTTGG AACCACCCGC
TACCGTAAAC CCCGCCTGTT CGTGGCGACC CTGCGCTACT CCCGGCGCAG CTTTCGCCGC
GTGGTCTGGA AGTCCAGCCA GGAGACGTGG GCCCGACTGC ATGAGCAGGC ATGGCGCTAC
TTCGGTGGGT GTTGCAGATA CGTGGTGCTG GACAACCTGA AGGAAGGCGT GCTCAAGCCC
GACATCCACG AGCCCGAGCT CAACCCGGTC TACGCCGCCG CGCTCAAGCA CTACGACGTC
GTGGGTGACC CCGCCCGCGT ACGAGATCCG AATCGCAAAG GCACCGTCGA GAACGCCATC
GGCCACACCC AGGCGACCGC CCTCAAGGGC CGTCGCTTTG AGACCATCGA AGAGCAAAAC
GACTTCCTTG AGCACTGGGA AGTGACCTGG GCCGCCACCC GTATCCACGG CAGTGAGCGC
CGCCAAGTAC AGGCCATGTT CGAAGAAGAG AAGCCCCACT TGCAAGCCCT GCCCATCGTG
GGCATGCAGT ATTTCACCGA GTCCCAGCGC ACCGTCTACG ACGACACCTG CGTGCGCGTT
GACCACAGCA GCTATGCCGC GCGCCCGGCC CCCATTGGCT CCCTTGTTCT GGTGCGCATC
TTCGAGCACC GCATCGAGAT TCGTGACCTC CAGTCCAAAT CCCTGCTGCG TACCCACCCC
CGCGCCCAGC GCCCAGGATC GGTGATCCTG CCCAATGAGG AGCGCGTCTT CAACCCATCG
CGTGAGACCC TGTACATCCT CAACCAGGCC AAGGACATTG GCCCCCAGGC ACATCGGCTG
TGCGAGATGC TCTTTGGCAT TGAGGGGCGT GTGGGCCAGC GCAAGCTCTG GGGCATCGTG
GGCCTGGGCC GGACCTACCC GCACCGCCTG GTCAACTCCG CATGCGAGCG CGCCCTGAAT
GATGGCCTTT ACAGCTACAA GCACGTCAAG GCGCTCACCG AGCGGCTCGT GGCGGACGCC
CTGGCCGCCA TCGATTCTTC GCCAGAAACT CCCCCCGCCC AGGCCGAACT GCCCCTGACT
CAGGAGCACC ACCTCATCCG AAGCCCTGAT GAGTACGCAG ACCTTTTTGC CCGCTGCAGC
GCCCAGTCAT AA
 
Protein sequence
MNVLKLHLQT TIWTLLKAGS TQRQIERATG ISRHTIPAYK KQFDSQNPDT ARDQSSAPIQ 
TAPPWPPTPL PEPLTSASIC EPYRDYVEAQ LRLKRNAMAI YQDLVDQFGF KGAYNAVKRF
TAKLRYREPE QFDRLEFSPG EEMQVDYGEG APTRVLGTTR YRKPRLFVAT LRYSRRSFRR
VVWKSSQETW ARLHEQAWRY FGGCCRYVVL DNLKEGVLKP DIHEPELNPV YAAALKHYDV
VGDPARVRDP NRKGTVENAI GHTQATALKG RRFETIEEQN DFLEHWEVTW AATRIHGSER
RQVQAMFEEE KPHLQALPIV GMQYFTESQR TVYDDTCVRV DHSSYAARPA PIGSLVLVRI
FEHRIEIRDL QSKSLLRTHP RAQRPGSVIL PNEERVFNPS RETLYILNQA KDIGPQAHRL
CEMLFGIEGR VGQRKLWGIV GLGRTYPHRL VNSACERALN DGLYSYKHVK ALTERLVADA
LAAIDSSPET PPAQAELPLT QEHHLIRSPD EYADLFARCS AQS