| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5309 |
|---|
| Symbol | |
|---|
| ID | 4016268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007950 |
|---|
| Strand | + |
|---|
| Start bp | 66276 |
|---|
| End bp | 66914 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637944932 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_552064 |
|---|
| Protein GI | 91791114 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3316] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACCT GCGTGCGCTG GTATGTAGCC TACCCGCTGA GCCTTCGCCA CATTGAAGAG
ATGATGCAGG AGCGCGGTGT TGTCGTTGAC CACGCCACCG TGCATCGCTG GGCGATCAAG
ATGGTGCCGG TGCTGGCTGC CGTATTTCGT CGGCGCAAGC ACCCCGTTGG GAAGAGCTGG
CGGATGGATG AGACCTATAT CAAGGTGGCT GGTGAATGGA AATATCTGTA TCGGGCCGTT
GATCGCCAGG GCGATACGGT GGACTTCCTA TTGACTGCCA AGCGAGATAT GGCGGCTGCC
CGGCGCTTCC TGGAGCGGGC GATCAACCTG CACGACGTGC CAGAGAAGAT CACCATCGAC
AAGAGCGGCG CGAACACTGC GGCCATTGAA AGCGTGAAAG CAGACGCCTG CGTTGATATT
TTGATGCGCC AATGCAAATA CCTCAACAAC ATTGTCGAGC AGGACCATCG GGCCGTCAAA
AGGGTCACCC GACCGATGCT GGGGTTCAAA TCGTTTTGGA GTGCGCGGAT CATCATTGCC
GGCATCGAGA CCATGCACAT GATCCGCAAG GGGCAGATGG ACTGCCCCGC CGGTCAACCC
ATGTCCGCAG CCCAGCAGTT CTACAGCCTC GCTGTTTGA
|
|---|
| Protein sequence | MLTCVRWYVA YPLSLRHIEE MMQERGVVVD HATVHRWAIK MVPVLAAVFR RRKHPVGKSW
RMDETYIKVA GEWKYLYRAV DRQGDTVDFL LTAKRDMAAA RRFLERAINL HDVPEKITID
KSGANTAAIE SVKADACVDI LMRQCKYLNN IVEQDHRAVK RVTRPMLGFK SFWSARIIIA
GIETMHMIRK GQMDCPAGQP MSAAQQFYSL AV
|
|---|
| |