| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5297 |
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| Symbol | |
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| ID | 4016256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | + |
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| Start bp | 51125 |
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| End bp | 52003 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637944922 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_552054 |
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| Protein GI | 91791104 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.499574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGG CGCACGCGCA ACACCCCAAA TTCGGCCCCG GCGACGAAGC GCTGGCCGCG
CTCCCGACGG TCTACCGCGA CGACCTGTTC GCCGGCAAGG TGGTGCTGGT GTCGGGCGCC
GGCAGCGGCA TCGGCAAGGC GATTGCCTTT TTGTTCGCCC GGCTGGGCGC CACGCTGGCC
ATCTGCGGGC GCAAGGCCGA CAAGCTGGAA GACTGCGCCG AAAAACTGCG CGCGCTGTCG
GATCGCGAGG TGTTCATCTA CCCGATGACC ATCCGCGAGC CCGAGCAGGT GGACGCCATG
CTCAGCGCCG TGTGGGAAAG TTTCGGCGGC GTGGACGTGC TGGTCAACAA CGCCGGTGGC
CAGTTCGCCG CCCACGCAAT GGACTTCACC GACAAGGGCT GGAACGCGGT GATCGACACC
AACCTCAACG GCAGCTGGTA CATGATGCAA GGCGCGGCCA GGCGCTGGGT GGAACAGGGC
CGTCCCGGCA ACATCGTCAA CATCACCGCC GCCATCGAAC GCGGCCTGAC CGGCATGGCA
CATACCACCG CCTCGCGTGC GGGCGTGATT GCACTGTCGC GCACGCTGGC CGTCGAATGG
GCCGAGCACA ACATCCGCGT CAACTGCATC GGCGCCGGCG CCATCGAGAG CAACGGCTTC
AACAACTACC GCGAAGAAAA CGTCTCGACC TTCTACCAGT GCAACCCGAT GAAGCGTCCC
GGTGACGTGC AGGACATCGC CGAGGCAGTG GTCTACCTCG CAGCCCCTTC GGGCAAGTTC
ATCACCGGCG AGTTGCTCAA CATCGAGGGT GGCATGCTGC TGTGGGGCGA GTTTTGGCCG
GCCGGTAAAC CCGACTACTT CAAGGTCGAT CCGTCATGA
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| Protein sequence | MTAAHAQHPK FGPGDEALAA LPTVYRDDLF AGKVVLVSGA GSGIGKAIAF LFARLGATLA
ICGRKADKLE DCAEKLRALS DREVFIYPMT IREPEQVDAM LSAVWESFGG VDVLVNNAGG
QFAAHAMDFT DKGWNAVIDT NLNGSWYMMQ GAARRWVEQG RPGNIVNITA AIERGLTGMA
HTTASRAGVI ALSRTLAVEW AEHNIRVNCI GAGAIESNGF NNYREENVST FYQCNPMKRP
GDVQDIAEAV VYLAAPSGKF ITGELLNIEG GMLLWGEFWP AGKPDYFKVD PS
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