| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5296 |
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| Symbol | |
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| ID | 4016255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | + |
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| Start bp | 50265 |
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| End bp | 51128 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637944921 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_552053 |
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| Protein GI | 91791103 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.913032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAG ACTCTACCTT CGGCTTCGAC GACGAAGCCC TCGCCAACCA AGCCACGGTT
TACCAGCCGG GTCTATTCAA GGACAAGGTC GTGATGGTCT CTGGCGCCGG CAGCGGCATC
GGCAAGGGCA TCGCCTTCCT GTATGCGCGC CTGGGCGCCA GGCTGGTTAT CTGCGGACGT
GACGCCGCCA AGCTGGCGTC TTGCGCTCAG TGGCTGCGCA AACTGGGCAG TCCGGACGTG
CTGGTGCAGC CCATGACCAT CCGCGAGCCC GAGCAGGTGG CGCAGTTGAT GGACGCGGCG
TGGCAACACT TCGGGCGCGT CGACGTGCTG GTCAACAATG CCGGCGGACA GTACCCTCAG
CGGGCGCTGG ACTTCACGGT CAAAGGCTGG AAGGCCGTGA TCGACACCAA CCTCAACGGC
ACCTGGTACA TGATGCACGC CATCGCCCGT CGCTGGAAAG ACACGGGCGC AGCGGGCAAC
ATCGTCAACA TCGTGGCCGT CACCCAGCGC GGCATGCCGG GCGTGGCGCA CACTTGCGCC
GCGCGCGCGG CGGTCACCTA TCTGTCCAAG ACCGTCGCGG TCGAATGGGC CGAGTACGGC
ATTCGCATCA ACTGCATCGC CCCCGGCGTC ATCGAGAGCA CGGGTTTTCG CCAGTACTCG
GACGAGGCGG TCAAGGCCTT CTCGGTCGCC AACCCGATGA AGCACGTGGG TGACGTGCAG
GACATTGCCG AAGCGGCGGT CTACCTGAGC GCGCCCAGCG GCAAATTCAT CACCGGCGAG
CTGCTCACGG TGGACGGTGG CGGCGTACTC TGGGGCGAAG CCTGGACCAT TCCAAAACCT
GATTACTTCA AGGTGACCCC ATGA
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| Protein sequence | MTADSTFGFD DEALANQATV YQPGLFKDKV VMVSGAGSGI GKGIAFLYAR LGARLVICGR
DAAKLASCAQ WLRKLGSPDV LVQPMTIREP EQVAQLMDAA WQHFGRVDVL VNNAGGQYPQ
RALDFTVKGW KAVIDTNLNG TWYMMHAIAR RWKDTGAAGN IVNIVAVTQR GMPGVAHTCA
ARAAVTYLSK TVAVEWAEYG IRINCIAPGV IESTGFRQYS DEAVKAFSVA NPMKHVGDVQ
DIAEAAVYLS APSGKFITGE LLTVDGGGVL WGEAWTIPKP DYFKVTP
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