| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5292 |
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| Symbol | |
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| ID | 4016251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | + |
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| Start bp | 46280 |
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| End bp | 47077 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637944917 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_552049 |
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| Protein GI | 91791099 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.609253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTG ATCTCAAAAA CAAATCGGTC ATCGTCACCG GTGGCGGCTC GAACATCGGC
CGTGCCATCG TGCTCGGCTT CGCTGCCGAA GGCGCCCACA TCACCATCGG CGACGTGGAT
GAGCAGCAGG CACAAAAGAC GGCCGAACTC GCTTTGCTCA GCGGCGCAGC GTCGGCGCAG
GTTGTCAAGA CCGATGTCAC CCAGCTCGAT CAGGTGCAAG CCATGTTCAA GGCCGCAGTT
GACAAGTTTG GCGGCGTCGA TGTACTCGTC AACAACGTCG GCTGGGACCA GTTGATGTTC
TTCACACAGA CGACCCCCGA TCTCTGGCAG AAGATCATCG CCATCAACTA CGTCGGCGTT
CTCAACTGCA CCAAAACCGC ACTCGATCTG ATGATTCCCC GCAACGCGGG CTCCATCGTC
TCGATCAGTT CCGACGCCAG CCGGCAGGGC GAGCCGCGCG AGGCCGTGTA CGGCGGCGTC
AAGGCCGCCA TCAACAGCTT CATGAAAACG ATCGCCAAGG AAAACGGACG TTACGGCATC
CGCTGCAACG TGGTCTGCCC CGGCATCACG ATCCCGAGCA CCACCGACGA AGTGGGCGGA
AGCAGCATGT GGGTTGATGC CGACAGCATG TTCACGCCCG AACAACTGGA AAAAGTCGCC
AAGGCGCTGC CGCTGCGCAA GGTCGGGCGG CCGCAGGATA TTGCCAATGC CGTCGTCTTC
CTGTCTTCGG CGAAGGTTGC GGGTCATGTC ACCGGGCAGG TCCTGTCCGT CTCCGGTGGC
TACAGCATGA TCGGCTAA
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| Protein sequence | MDIDLKNKSV IVTGGGSNIG RAIVLGFAAE GAHITIGDVD EQQAQKTAEL ALLSGAASAQ
VVKTDVTQLD QVQAMFKAAV DKFGGVDVLV NNVGWDQLMF FTQTTPDLWQ KIIAINYVGV
LNCTKTALDL MIPRNAGSIV SISSDASRQG EPREAVYGGV KAAINSFMKT IAKENGRYGI
RCNVVCPGIT IPSTTDEVGG SSMWVDADSM FTPEQLEKVA KALPLRKVGR PQDIANAVVF
LSSAKVAGHV TGQVLSVSGG YSMIG
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