| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5266 |
|---|
| Symbol | |
|---|
| ID | 4016218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007950 |
|---|
| Strand | - |
|---|
| Start bp | 13535 |
|---|
| End bp | 15568 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637944891 |
|---|
| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
|---|
| Protein accession | YP_552023 |
|---|
| Protein GI | 91791073 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA CTTTACTGAT CGCCAACCGC GGCGAGATTG CCTGCCGCAT CGCCCGCACC
GCGCGCCGCA TGGGCTTGCG CACGGTGGCG GCGTACTCCG ACGCGGACCG CGACGCGCTG
CACGTGGCCC TGTGCGACAC GGCCGTGCGT ATCGGCCCGC TGGAGGCCGC GCGCAGCTAC
CTCGATGCCG CTGCCATCGT GGCCGCGGCG CGCGCCGCTG GTGCGCAGGC CATCCATCCG
GGCTACGGCT TCCTGTCGGA GAGCCTGGCC CTGATCGACG CCTGCGAAGC CGCCGGTCTT
ATTTTTGTCG GCCCCTCGCG CGAGGCGATC CGGCGCATGG GGTCGAAGAT CGAATCCAAG
CGCATCGCGC TGGACGCCGG CGTGCCGGTG GTGCCGGGCT ACCACGCCGA CGACCAGGAC
CCTGGGGTCT TGCAGGCGGC GGCCAGTGAC ATCGGCTACC CGGTGCTGAT CAAGGCCTCG
GCCGGCGGCG GCGGCAAGGG CATGCGGGTG GTGCGCAGCG CGGCTGAATT CGCGGCCGCG
CTGGACACCG TGCGGCGCGA AGCCCAGGCC TCGTTCGGCG ACGACCGCGT GCTGCTGGAG
CGCTACCTGG ACGAGCCGCG CCACCTCGAA GTGCAGTTGC TGGGCGACAA GCACGGGCAA
CTGGTGCACC TGTTCGAGCG CGAATGCTCG ATCCAGCGCA ACCACCAGAA AGTGATCGAG
GAAGCGCCCG CGCCGCACCT GCCGCCGGCC GTGCGCGAGG CCCTGTTCGC GCACGCGCTG
ACGATGGGGC GCGCCATCGG CTACGACAGC ACCGGCACCA TCGAGTTCAT TCACGACAGC
CGCAGCGGTG ACACCTTCTT TCTGGAAATG AACACCCGCT TGCAGGTCGA GCACCCGGTG
ACCGAGCTGA CGGTCGGCAT CGACCTGGTC GAATGGCAAC TGCGGGTGGC CGCCGGTGAG
GTGCTCGGCT TTGGCCAGGC CGACCTGTCG CAGCGCGGCT GCGCGATCGA GGCGCGCGTC
TGCGCGGAGA ATCCGGCGGC CGGTTTCGCG CCCGAGATCG GCACCCTGAT CGGCTACCGC
GAGCCGCGCG GCGAGGGTGT GCGGGTCGAC AGCGGCGTGC GTGTCGGCAG CCGGGTTACG
CCCTATTACG ACTCCATGCT GGCCAAGGTG ATTGCCTATG CCGACGACCG GCCGACCGCC
GCACGGCGGC TCGCCACGGC ATTGGACGAC ACGGTGCTGC TCGGCGTGCA CAGCAACCTC
GGCTTTCTGG CCGATCTGCT GCGCCACGAG CACTTTGCGC AAGTACTCAG CACGCACTAC
ATCGAACGTG CCTTTCCCGC CGGCTGGCAG CCGCGCGCGG ACGATGAGCT GGCCATGGCC
GCTGCCGCCT TGCATGGCGT GCTGGCCACG CAGGCCATGG CCGGGCAGAA GTCGCCTGGG
GCCTGGCAGT CACTCGGGGC CTGGCGGGCG GCCGGCGCTG GGAGTGGCGT CGGCAGCACG
CAGGTGCTGC TTGAAGACGG GCAGCGCCGC GTGCACGAAG CCAGCGTGTC GCCGCAGGGC
GACGGTTGGC GCGTGCGCGT TGGCGAGCAT GACCTGAGCC TGGCGGCGAC GCTGAGCGGC
GACACCCTGG CGTTGCAGCG CGATGGCCTG ACGGTTCGCT TCACGGTGGC GGCGGCACAG
CACGCCACGC AGGGTGAGCA GCTGTGGCTG GCCGGCCCGG GCGGCACCTG GGCCTGGCGC
CGGCTTGACC GCTGGCAGCG CGCGCTCAAG GGCGCGGCAG GCGCCGATGA GCGGGGCGGC
AACCGTCTGC TCGCGCCCAT GCCCGGCCTG GTGACGCAGG TGCAGGTCAG CGTGGGCATG
GTGGTGAACG CGGGCGACAT CCTGGTGCAG ATGGAAGCGA TGAAAATGGT GCACACGCTG
AGCGCTGCCG CGCCGGGACG GGTGGCCGAG CTGCGCTGCC GCGTCGGCGA CGCGGTGCGC
GGTGGTGATG TATTGGTAGT GATGGAAGCA ATGGAAACCG AGGAAAAACA ATGA
|
|---|
| Protein sequence | MFETLLIANR GEIACRIART ARRMGLRTVA AYSDADRDAL HVALCDTAVR IGPLEAARSY
LDAAAIVAAA RAAGAQAIHP GYGFLSESLA LIDACEAAGL IFVGPSREAI RRMGSKIESK
RIALDAGVPV VPGYHADDQD PGVLQAAASD IGYPVLIKAS AGGGGKGMRV VRSAAEFAAA
LDTVRREAQA SFGDDRVLLE RYLDEPRHLE VQLLGDKHGQ LVHLFERECS IQRNHQKVIE
EAPAPHLPPA VREALFAHAL TMGRAIGYDS TGTIEFIHDS RSGDTFFLEM NTRLQVEHPV
TELTVGIDLV EWQLRVAAGE VLGFGQADLS QRGCAIEARV CAENPAAGFA PEIGTLIGYR
EPRGEGVRVD SGVRVGSRVT PYYDSMLAKV IAYADDRPTA ARRLATALDD TVLLGVHSNL
GFLADLLRHE HFAQVLSTHY IERAFPAGWQ PRADDELAMA AAALHGVLAT QAMAGQKSPG
AWQSLGAWRA AGAGSGVGST QVLLEDGQRR VHEASVSPQG DGWRVRVGEH DLSLAATLSG
DTLALQRDGL TVRFTVAAAQ HATQGEQLWL AGPGGTWAWR RLDRWQRALK GAAGADERGG
NRLLAPMPGL VTQVQVSVGM VVNAGDILVQ MEAMKMVHTL SAAAPGRVAE LRCRVGDAVR
GGDVLVVMEA METEEKQ
|
|---|
| |