| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5259 |
|---|
| Symbol | |
|---|
| ID | 4016211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007950 |
|---|
| Strand | - |
|---|
| Start bp | 7942 |
|---|
| End bp | 8808 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637944884 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_552016 |
|---|
| Protein GI | 91791066 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.956924 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGC GCCGGGAATT TTCCGGTTTC GCGGGCGGCC CCCTGGTGGC CGATGTCTAC
GGCCCGGTGG GCGCGCCCAC GGTGCTGCTG CTGCACGGTG GCGGACAAAC CCGCCATGCC
TGGGGCAAGG CGGGACAGGT GCTGGGGGAC GCCGGCTGGT ACACCGTGGC GCTGGACTTG
CCGGGTCACG GCGACAGTGC CTGGGCCGCC GATGGCGACT ACCGCATCGA GACGCTGGCT
GACACCATGT GCCGCATCTG GCGCGAGCTG GGAACGCCGC TGGCGGTGGT CGGTGCCTCG
CTGGGTGGCC TCATCAGCAT GGCCGCCGTG GGCCGGGCCG ATGCGCCGCC GATCAGCGCG
CTGGTGCTGG TGGACGTTGC GCCGCGCATG GAACAAGCCG GTGTCGAGCG CATCGTGCGC
TTCATGCGGG CGCGGCCCGA GGGTTTTGCG TCGCTCGAAG AAGCCGCCCA GCATATTGCC
GCTTACCGGG GCCGGCCCAT GGAAGGCCCG GTCGAGGGCC TGAAGAAAAA CCTGCGCCTC
AACGCGCAAG GCCGCTGGAA CTGGCATTGG GATCCGCTCA TGATGAGCGA GGCCAACCAC
AACCACCGGC GTGACGCCGA CGGCTACGAG CGCGCCTTGC GCGGCCTGCA GGCGCCCACC
CTGCTGCTGC GCGGCCAGCG CAGCGACGTC ATCAGCGAAG AAGATGCGCG CGCCCTGGTG
CAAACCCTGC CGCGTGCGCG CTTTGTCGAC CTCAAGGGCG CCGGCCACAT GATTGCGGGT
GATGCCAACG ATGCCTTTGT CGCCAGCGTC GCGACCTTTC TGCATGAAGT GATGTCGCCG
GCACAGTCCC CGGCGAGCGG AATCTGA
|
|---|
| Protein sequence | MTARREFSGF AGGPLVADVY GPVGAPTVLL LHGGGQTRHA WGKAGQVLGD AGWYTVALDL
PGHGDSAWAA DGDYRIETLA DTMCRIWREL GTPLAVVGAS LGGLISMAAV GRADAPPISA
LVLVDVAPRM EQAGVERIVR FMRARPEGFA SLEEAAQHIA AYRGRPMEGP VEGLKKNLRL
NAQGRWNWHW DPLMMSEANH NHRRDADGYE RALRGLQAPT LLLRGQRSDV ISEEDARALV
QTLPRARFVD LKGAGHMIAG DANDAFVASV ATFLHEVMSP AQSPASGI
|
|---|
| |