| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5256 |
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| Symbol | |
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| ID | 4016235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | - |
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| Start bp | 4131 |
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| End bp | 5780 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637944881 |
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| Product | cyclohexanecarboxylate-CoA ligase |
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| Protein accession | YP_552013 |
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| Protein GI | 91791063 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR03208] cyclohexanecarboxylate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.242586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAT CCCAACTGAG CCCCCAACTG GTTCAACAAG CCCGGGCCGG CGGCCACTGG
CACAACAAGA CCCTGCTCGA CTTCCTGGAT GAAGTCGCGC CCAGCCGCCT CGACAAAGTG
GCCGTGACCG ACCTCAACAG CATGACCGGG CAGGCGAACA CCTTGTCGTA CCGGCAACTG
CTGCGCCTGT CCAAACGCAT CGCGCTCGGT CTGGCGGCGC TGGGCGTGCA GCGGGGCGAT
GTGGTCTCGT ACCAGTTGCC CAACTGGTGG CAGTTCGTGG CACTGCACCT GGCCTGCCTG
CGTATCGGCG CGGTCACCAA CCCGGTGATG CCGATCTTTC GCCATCACGA GTTGACCTTC
ATGCTGGGGC TGGCCGAATC GAAGGTCATG ATCGTGCCGC GCGAGTTTCG CGGTTTTGAC
CATGCCGCGA TGCTGCGCGA AATTCAGCCG GCGCTGCCGC AGCTCAAGCA TATCTTTGCA
ATTGGCGGCG AAGGCGACAT GTCGTTCGAG AAGCACTTCA TCGAGCGCCG CTGGGAGCAG
GAAACGCCCG ATGCCGACCA GGTGCTGGCC GAGCGCCGCC TGCGCCCGGA CGAAGTGATG
CAGTTGCTGT ACACCTCCGG CACCACCGGT GAGCCCAAGG GCGCGCTGCA CACCTCCAAC
ACCCATTTCG CGAACATCGT CGAGGTTGTC AAGCGTTGCG GCCTGACGGC CGAGCATGTG
TGCTTCATGC CCTCACCGAT GGCGCACCAG ACGGGTTTTG CCATCGGCAT GGAACTGCCG
CTTATGCTGG GCGCCAAAAT GGTGCTGCAA GACATCTGGG AGCCGGAACT GGCCCTGACG
CGGATTCAGG ACGAAGGCGT GAACTTCATG ATGGCGGCCA CCCCCTTCCT GGCCGACCTG
ACGGATCATC CGGACCTGCC GCGCTATGAC ATTTCCACGC TGGATGTTTT CATCTCGGCT
GGCGCGCCCA TCCCCCGCAC ACTGGTCGAG CGCGCCACTG AGCGCCTGAA GGCGCACATC
GTGTCGGCAT GGGGCATGAC AGAGAATATC CTGGTCACCG GCACACGACT GGACGATGTT
CCCGAGAAGG TGTTCGGCAC CGACGGCGTG CCAGTGCCGG GCATGGAAAT CCGCGTCGTC
GATGCCGCGG GGCAGGCGCT GGCCGTGGAC CAGGAGGGCG AGCTGCAATC GCGGGGGCCG
AGCCACTTCG TGGGCTACCT CAAGCGCCCC GAACGCTACG ACATGGATGA TCAGGGCTGG
TTCAAGACCG GCGACCTGGC GCGCATCGAC GCCGACGGCT GCGTGCGCAT CACCGGCCGG
GCCAAGGACA TCATCATCCG GGGCGGCGAG AACGTGCCGG TGGTCGAGGT CGAGCAGATG
CTGCACCGCC ATCTGGCCAT ACAGACGGCC GCCGTGGTCG GCGTGCCCGA TGCGCGGCTG
GGCGAGCGCG CGGTGGCCTA TGTCACGCTC AGGCCGGGTC ACGGTCTCAC GTTCGAGCAG
ATGAAGCGCT TTCTTGAAGA GCAGCGCATG ACCAAGCAGT ATTGGCCGGA AACCTTGATC
GTCCTGGACG ACTTGCCGCG CACACCCACC GGAAAGATCC AGAAGTTCCG CTTGCGCGAG
ATGGCGCGTG CTGAAAACAA GACCGATTGA
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| Protein sequence | MIESQLSPQL VQQARAGGHW HNKTLLDFLD EVAPSRLDKV AVTDLNSMTG QANTLSYRQL
LRLSKRIALG LAALGVQRGD VVSYQLPNWW QFVALHLACL RIGAVTNPVM PIFRHHELTF
MLGLAESKVM IVPREFRGFD HAAMLREIQP ALPQLKHIFA IGGEGDMSFE KHFIERRWEQ
ETPDADQVLA ERRLRPDEVM QLLYTSGTTG EPKGALHTSN THFANIVEVV KRCGLTAEHV
CFMPSPMAHQ TGFAIGMELP LMLGAKMVLQ DIWEPELALT RIQDEGVNFM MAATPFLADL
TDHPDLPRYD ISTLDVFISA GAPIPRTLVE RATERLKAHI VSAWGMTENI LVTGTRLDDV
PEKVFGTDGV PVPGMEIRVV DAAGQALAVD QEGELQSRGP SHFVGYLKRP ERYDMDDQGW
FKTGDLARID ADGCVRITGR AKDIIIRGGE NVPVVEVEQM LHRHLAIQTA AVVGVPDARL
GERAVAYVTL RPGHGLTFEQ MKRFLEEQRM TKQYWPETLI VLDDLPRTPT GKIQKFRLRE
MARAENKTD
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