| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5255 |
|---|
| Symbol | |
|---|
| ID | 4016234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007950 |
|---|
| Strand | - |
|---|
| Start bp | 2874 |
|---|
| End bp | 4043 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637944880 |
|---|
| Product | thiolase |
|---|
| Protein accession | YP_552012 |
|---|
| Protein GI | 91791062 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC GAGAAGCAGT GATCGTCGGC GTTGCCGACC TGCCCCTGAA GGACGGCAAG
GTACTCAGGC CGATGTCGGT GCTTGAGGCC CAGGCGCTGG TGGCGCGTGA TGCGCTCAAG
GACGCGGGCA TTCCGATGAG CGAGGTCGAT GGTCTGCTGA CCGCCGGCTT GTGGGGCGTG
CCCGGTCCGG GCCAGTTGCC GACCGTGACG CTGTCGGAGT ACCTGGGCAT CACCCCACGC
TTTATCGACA GCACCAACAT CGGCGGCTCG GCCTTTGAGG CGCACGTGGC CCATGCGGCG
ATGGCCATCG AGGCCGGCCG CTGCGAGGTG GCGCTGATCA CCTACGGCAG CCTGCAAAAG
AGCGAGATGA GCCGCAACCT GGCCGGGCGG CCCGCCGTGC TGACCATGCA GTATGAGACG
CCGTGGGGCA TGCCCACGCC GGTGGGCGGC TACGCCATGG CGGCCAAGCG CCACATGCAC
GAATACGGCA CCACCTCCGA GCAGCTAGCG GAGATTGCCG TGGCCACGCG CCAGTGGGCG
GCGCTCAACC CGGCGGCCAC CATGCGCGAC CCGCTGTCGA TCGAGGACGT GCTGAAAAGC
CCGATGGTCT GCGATCCAAT GCACCTGCTT GATATTTGTC TGGTCACTGA CGGCGGCGGT
GCCGTGGTCA TGACCACGGC CGAGCACGCC AGGGCGCTCG GGCGCAAGGC GGTCCATGTG
CGGGGCTATG GCGAATCGCA CACGCACTGG ACGATTGCCG CCATGCCCGA TCTGGCACGC
CTCACAGCGG CCGAGGTGGC GGGCCGCGAC GCCTTTGCCA TGGCGGGCAT CGGGCATGAC
GCCATTGACG TGGTCGAGGT CTACGACTCG TTCACCATCA CCGTGCTGCT GACGCTCGAA
GCGCTGGGCT TTTGCCAGCG CGGCGAGAGC GGCGCCTTCG TGTCCAACCA GCGCACCGCG
CCGGGTGGGG CATTCCCGCT CAACACCAAC GGCGGCGGTC TGTCCTACGC GCACCCTGGC
ATGTATGGCA TCTTCCTGCT GATCGAGGCG GTGCGCCAGT TGCGCGGCGA ATGCGGCCCG
CGCCAGATCG CGAATGCCGT GACCGCGCTG GTCCACGGCA CCGGCGGCAC GCTCTCCAGC
GGTGCCACTT GCATTCTTTC CACCCGGTGA
|
|---|
| Protein sequence | MKKREAVIVG VADLPLKDGK VLRPMSVLEA QALVARDALK DAGIPMSEVD GLLTAGLWGV
PGPGQLPTVT LSEYLGITPR FIDSTNIGGS AFEAHVAHAA MAIEAGRCEV ALITYGSLQK
SEMSRNLAGR PAVLTMQYET PWGMPTPVGG YAMAAKRHMH EYGTTSEQLA EIAVATRQWA
ALNPAATMRD PLSIEDVLKS PMVCDPMHLL DICLVTDGGG AVVMTTAEHA RALGRKAVHV
RGYGESHTHW TIAAMPDLAR LTAAEVAGRD AFAMAGIGHD AIDVVEVYDS FTITVLLTLE
ALGFCQRGES GAFVSNQRTA PGGAFPLNTN GGGLSYAHPG MYGIFLLIEA VRQLRGECGP
RQIANAVTAL VHGTGGTLSS GATCILSTR
|
|---|
| |