| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5244 |
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| Symbol | |
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| ID | 4015971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 354490 |
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| End bp | 355563 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637944871 |
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| Product | type II secretion system protein |
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| Protein accession | YP_552003 |
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| Protein GI | 91791052 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.601001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTG ATCAGCTGAA CATTGACTTC GCAAGGTTCC AGTTCAAGAA CGATGCGAAG
ACGCGCCAAC GCCTGTGGAA AAAGATGTCC AAGCTGCTCG GAGACGGCAT ACCAATCATT
CCGGCCCTGC AGGAGCTTAA GGCCCTGAAT AAACCGACGT CACCACTTGC ACTTGCGCTG
GTTGATTGGA TTCGAGGTCT CAACAATGGG CGAAAGATTT CAGATGTAGT CATGCCCTGG
GTGTCAACAG AAGAATACAT GTTGATCGTA GCGGGTGAAC AATCGGGCAA GCTCAGTGAG
TCTCTGCTTT CTGTCGTGAG GGTATCTAAG GCCAAATTGG AGATACGGAC TGCCGTTGTT
AGCGGCATTG CATATCCGGC TTTTCTGGCC CTCCTATCGT TCGGCATTCT TTATCTCTTC
GCCTTCAAGA TCATCCCTGC GTTTACCAGA GCGGCTAAGT CTGACGCATG GTTTGGCGTG
GCCAGGCTCA TGATTGACGT GTCAACGTTT GTTCAAAACT GGCTTATCTG GATGGTGGTT
TTGCTGGTCG TTTTTACGAT CGCCTTTTTC GCCTCCCTTC CTCTTTGGAA CTCATCACTC
CGCACGAGGC TGGATCGCTA TCCGCCATAT AGCATTTACC GTGTTATGCA GGGTTCTTCC
TGGCTGATCG CACTTTCAGC CCTTGTGCAA GCCGGCACCC GCGTTGAGTC GGCTATTGAG
CAGTTAGGGC AGGGTGCCTC GGCCTGGGCT GCAACGAGGT CAGCAGCCGC GCTCAAGGGA
CTACGTGCAG GTCGTGACCT CGGTGAATCA CTACAAAAGT CTGGATACGA ATTTCCGGAC
AGAGAAATTA TTTCAGACAT TCGCATCTAC GCCACCAAGT CGGGATTTGA TGAAGCTTTG
CGCATCATCG GCAATGACTG GATTAGCGAG TCCGTTGAAC GAATCCAGGC CTTGATGAAG
ATCGTTTTTG GCATCGCATT GATGCTCGTC GGTTCACTTA TTGCGTTTGT CGTCTCTGGC
CTCATTGCAA TGCAACTTCA GCTTACGCAG TTGCTTCAAC GCGGCATTCA CTAG
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| Protein sequence | MNLDQLNIDF ARFQFKNDAK TRQRLWKKMS KLLGDGIPII PALQELKALN KPTSPLALAL
VDWIRGLNNG RKISDVVMPW VSTEEYMLIV AGEQSGKLSE SLLSVVRVSK AKLEIRTAVV
SGIAYPAFLA LLSFGILYLF AFKIIPAFTR AAKSDAWFGV ARLMIDVSTF VQNWLIWMVV
LLVVFTIAFF ASLPLWNSSL RTRLDRYPPY SIYRVMQGSS WLIALSALVQ AGTRVESAIE
QLGQGASAWA ATRSAAALKG LRAGRDLGES LQKSGYEFPD REIISDIRIY ATKSGFDEAL
RIIGNDWISE SVERIQALMK IVFGIALMLV GSLIAFVVSG LIAMQLQLTQ LLQRGIH
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