| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5236 |
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| Symbol | |
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| ID | 4015963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 345269 |
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| End bp | 346141 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637944863 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_551995 |
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| Protein GI | 91791044 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG
[TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.385034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTC GGCATTTGGC GCTAGTAGCC GCTGTTTCGC TAACTGGTTT TGTGGGTCTA
TCCCATGCGG AACTGATCGC AACCCCTCTG ACAGGCGATA CGCGCCTGGT GCAGTTTACC
TACGACGAAG ACAACACCTT TCTGGTGCTT GCTAAGCCAA AGGCCGTGAC CCATCTGCAG
TTTGCTACAG ATGAAATGCT GCAGTCAGTT GCTTCGGGTG ATACCGCGCA ATGGGAACTC
ACCCCCACGA AGAACCGGAA AAACCTGTTC ATCAAGCCAA AATTCGAAGG CATCGAGACT
TCGATGACGG TGATCACTGA CAAGCGCACC TATCAGTTTG TGCTGCGCTC AACGGCGGAC
GGCAAGAAGT GGTACCAGCG GGTGTCCTGG ATGTACTCAT CCAGTCTGGT ACTGGAACAA
GATGCCTTGC TGGATGCACA AGCGAACGTG CCCATGTCTG GTGGATTGCC TGAACCAGTC
CAAAGCAGCG GCATTCGCCC ACTCCAGCCA ACATTCAACC TTCCCCCCCT GAATTCTGCC
GGCGGATCTT CCACCACGTT GAAGCCTGAC TCTTTGCGCT TCAATTACAA GGTCGATGGT
GACGCTGCAT TCAAACCCAC ACAGGTCTTT GACGACGGCA AGTTCACCTA CCTGCGCATG
CCACAGGATG TGCAGGAGCT GCCAGCTCTC TTCGCTGTGA TTGAGGGGCA AGAATATTCC
CTGGTGAACT ACACGGTCGA TGGCAGCTAC ATGGTTGCAC AACGTCTGCT CGAAAACGCC
GTTCTCAAGC TGGGCAAGAG TGAAGTGCAG GTTACCAAGG TCAAGCCTGC TGGTGGCTTT
ATGGGCTTCA TGGGTGGGGA CAGCGCCAAA TGA
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| Protein sequence | MIIRHLALVA AVSLTGFVGL SHAELIATPL TGDTRLVQFT YDEDNTFLVL AKPKAVTHLQ
FATDEMLQSV ASGDTAQWEL TPTKNRKNLF IKPKFEGIET SMTVITDKRT YQFVLRSTAD
GKKWYQRVSW MYSSSLVLEQ DALLDAQANV PMSGGLPEPV QSSGIRPLQP TFNLPPLNSA
GGSSTTLKPD SLRFNYKVDG DAAFKPTQVF DDGKFTYLRM PQDVQELPAL FAVIEGQEYS
LVNYTVDGSY MVAQRLLENA VLKLGKSEVQ VTKVKPAGGF MGFMGGDSAK
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