| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5229 |
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| Symbol | |
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| ID | 4015956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 336326 |
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| End bp | 338866 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637944856 |
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| Product | Type IV secretory pathway VirB4 components-like |
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| Protein accession | YP_551988 |
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| Protein GI | 91791037 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.738503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCAT TTGAAGACCT TTTCAACAAG CCGCGTAAAG CGGCTCGTTC CTTTGCTGAA
CTGCTACCTT GGTTCGCCCA AGTAGCTCCC GGGCTGGTAA TTTGCCAGGA TGGCTCGCTG
CTTGCGGGCT ACACCTTTGA GGGCTCGGAT GTCGAGGGGC GGCAGGACTT CGAATCCGAT
CAGAAGATCA ACCAGCTTCA AACGGCCCTG CGCACGCTGA CGGACAGAAT CACCATGTGG
ACGGTGCAGG AGCGCCGGTT TGTCTCTGGA TACCCGAAAG GGGACTTCTC CAGCCCTATT
GCCCGTGCGA TTGACGAGCA GTGGGAAAAG TCCATTTCCA AGCAACGCAA TGCACGGTTG
ACCCAGCGGA TCTACCTCGG GTTCAACTTT CCAAACTCCA GCGAGGCCTT CTTTGAAGCC
TTGCGCGCCG AACTGGAGGA AAATGATGGC AAGGTGCTCG CCGCATTGGG TGGACTGATC
AAGCGCCGAC TCTCCGACAA GGGCGCGATT GCGAAGGTCC GGGGGCAGCT GGCCGACATG
ACCACCGAGT TTGAAAAGCT GCTGGGAGCC TTCTCGGGGA TAGTCGAGAC AAACCTGGGG
TTCAAGCGGC TGGAGGGTGA AGAATTCCTG GGTGACCTGT ATTCCCGGGC CAACTTGGCT
TCACCTCCTG GGCCTGTTCG TTTGCCGAAA GGTGGTGCCT ATCTGAATAC TGCGTTGGCA
TCCGACACGC TGATCCGCCG CCAAGATCAG TTCGAGTTCA AAGGGCCGAC GAAAAGCGCA
TATGTTGCTG CTCTGTCCAC CACCGGCACG CCACAAGAGG CGTATAGCGG CTACATGGAT
TCCCTCATGG CGGTGGATTG CGAGTATGTC CTGGTACAGT GCTACCGCTT CATTGACCGC
ACCGTGGCCG AAAAAGCCAT TCAGGATGCG GAAATGTTCT ATCGCTCGGA GGTGAAGTCG
GTTCTGACGC GAGTCTTTGA ACGCATGACC GACTCCGAAT CGGAAAAGGT CAACACCGGT
AACCTGCAAC TGGCCCAGGA TGCACAGGAT GCTCTGGTTG AACTCACAGC TTCTGATGTG
AGCTACGGCT ACTACAACAT GACGATCCTT GCCCTCGGCA CAACGCAGAA GGAAGCCGAG
AATGCGGCAG ACCTGATGGC CAGCAATTTG CGGGCTAACG GCTTCACCAT CCTGCGCGAG
CGCCAGGGTC TGATGTCAGC GTTCTTGGCA ACCATGCCAG GCAATGCAGA TGCAATTCTT
CGTTGGAAGC TGGCTTCAAC GGCAAATCTG GCCGATCTGG CACCGATTCG TACGATTTCC
AAGGGTGAAC CTACGCATCC CCTGTTCTCG CGGCTTATCG GTCATGACGT GCCCGCTTTG
GCCAGGTTCT TGACGCCCTA CGGTGTCACC TATGACTTCA ACAATCACGA GACCGATGTA
GGTCATACCG CGGTCATTGG AGGTACCGGG GCAGGTAAAA CATCGCTGAT GACACTCCTG
ATCTCGATGT TCCAGAAGTA CAACCCTGGG CAGACATTCA TCTTCGACAT GAAATACTCG
TTGATGATGG CCACTGTGCT GCTGGGCGGT AAGCACATCG ATATGGGTGG AAAAGGTGGC
AAGACAATCG GGATGAACCC GGTAAAAACC ATGTTACTCG CCAATGACGA TATGCAACTT
CGCCAGTGGG TTGAAGTGCT CATTGGTGCC GGCGGAAACA CGATCTCTTC GAATGAGAGC
CAGGTAATTT ACACAGCCAT TCAAGGGCTT CGTCGGTCCC CACCTTCCAC ATGGCGCCTC
TCGGCCCTGT ACGCACTGAT CGCTGGTGCC GACCAAGATT TGGCCGCAAA ACTATCGCCC
TATGTCGACC GGACCGATGA TGATGAAATC GGCTCAGGGC CGTATGCGTC CTATTTCGAC
AACGATGAAG ATCACTTCCA GCTGACCCAG ATCGTCGGTA TGGAGGTTGA AGGCATCCTG
AAAACGCCTC AACTGGCAAG TCCCTTCATG GACTATGCGT TCTACAACAT CGAGCGCCGG
CTTGATGGAG CTACGCCCAC CCTGATCTAC ATCGAAGAAG CTTGGTACAT GCTGGCCAAC
AAGGCTTTCG TCGAGAAGTT CGAGACCTGG CTGCGCACAT TCCGAAGCAA ACGCGCATTT
ATTGTCTTTG CTACCCAGTC CTTGGGTGAA ATCGCACGTC TTGAAAACCT GGAGGGAATT
GTCACCAATA TTCCGACACA GATTCTGCTG CCCGCCGTGA AGAACTCAGT GCATCAGCAA
GCGGATCTGT ACAAGGATGT GTTCGGCATA AATGACAACC AACTTGATTT GCTATCCCGT
GCCATCCCCA AGCGGGATTA CTTGATCGTC AAACCATCGG TTACCCGCCT GGTTAGCACG
CAAATGCCGC CTTTGCTCAT TGCCATCAAT GAGGCAACAA CCCAGCCTTC TATGCGCTCT
GCTGTTCTTG CAGCAGCTGC CAAGGGCGGC CTCGATTGGG AACTTAATTT TGTAAGGGAG
GTGCTTCATG TTCAAGTCTA A
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| Protein sequence | MIAFEDLFNK PRKAARSFAE LLPWFAQVAP GLVICQDGSL LAGYTFEGSD VEGRQDFESD
QKINQLQTAL RTLTDRITMW TVQERRFVSG YPKGDFSSPI ARAIDEQWEK SISKQRNARL
TQRIYLGFNF PNSSEAFFEA LRAELEENDG KVLAALGGLI KRRLSDKGAI AKVRGQLADM
TTEFEKLLGA FSGIVETNLG FKRLEGEEFL GDLYSRANLA SPPGPVRLPK GGAYLNTALA
SDTLIRRQDQ FEFKGPTKSA YVAALSTTGT PQEAYSGYMD SLMAVDCEYV LVQCYRFIDR
TVAEKAIQDA EMFYRSEVKS VLTRVFERMT DSESEKVNTG NLQLAQDAQD ALVELTASDV
SYGYYNMTIL ALGTTQKEAE NAADLMASNL RANGFTILRE RQGLMSAFLA TMPGNADAIL
RWKLASTANL ADLAPIRTIS KGEPTHPLFS RLIGHDVPAL ARFLTPYGVT YDFNNHETDV
GHTAVIGGTG AGKTSLMTLL ISMFQKYNPG QTFIFDMKYS LMMATVLLGG KHIDMGGKGG
KTIGMNPVKT MLLANDDMQL RQWVEVLIGA GGNTISSNES QVIYTAIQGL RRSPPSTWRL
SALYALIAGA DQDLAAKLSP YVDRTDDDEI GSGPYASYFD NDEDHFQLTQ IVGMEVEGIL
KTPQLASPFM DYAFYNIERR LDGATPTLIY IEEAWYMLAN KAFVEKFETW LRTFRSKRAF
IVFATQSLGE IARLENLEGI VTNIPTQILL PAVKNSVHQQ ADLYKDVFGI NDNQLDLLSR
AIPKRDYLIV KPSVTRLVST QMPPLLIAIN EATTQPSMRS AVLAAAAKGG LDWELNFVRE
VLHVQV
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