| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5207 |
|---|
| Symbol | |
|---|
| ID | 4016012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | + |
|---|
| Start bp | 312685 |
|---|
| End bp | 315039 |
|---|
| Gene Length | 2355 bp |
|---|
| Protein Length | 784 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637944835 |
|---|
| Product | ribonucleotide reductase large subunit |
|---|
| Protein accession | YP_551967 |
|---|
| Protein GI | 91791016 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.984475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA ATGACAGCAA TTTGTCAGTG CCTCAGGCGC TGCAACAACT TTGTTATGAC
GTACTTCTTG AAAAGTACGC TGCGCCTGGT GAATCCAGTG TGCGTGAAAT ACAAGAGCGT
GTGGCAACAT CTCTCGCTGA CGATAAGGCT CAACAGGCCC GTTTTGTGAG TGCGCAGGCT
GGAGGTTTTG TACCAGGTGG CCGGATTAAT TCTGCTGCAG GTATGGACCG CGTCAGTACG
ATGATTAACT GCTTCGTGCA GCCGGTAGGT GACAGCATGT CTGGAAGCAA TCAGGATGGC
CAGCCAGGCA TCATGGATGC TCTGCGAGAA TCTGCTGAAA CGATGCGCCG CGGCGGTGGT
GTGGGCTACG ACTTTTCTTC CATACGTCCT GTGGGCGCGC GGGTGAAGGG GACGGATTCC
AAAGCCTCCG GCCCAGTGTC GTACATGCGT GTCTTTGATC GCATGTGCCA AACAGTCGAG
TCCGCCGGCG CTCGTCGTGG CGCCCAAATG GGCGTCATGC GCGTGGATCA TCCGGACATT
GAAATGTTCA TCGATGCGAA GAAGACCCCT GACTTCTCCC AGATGGGGTT GGATAAGAAA
GATGCTGACG GCCTGCTGGA TCTGGTTCGC AAGAATCAGG GGTTTGGATG GTCCCTACGC
TCTGCGTTCG CCACCTTGTC GAACTTCAAC ATCAGTGTTG CGGTGACCGA TGAGTTCATG
AATGCAGTGG TGAACGACAG TGACTTCGAT CTGGTGCACG ATGCTGAACC TGTTGAAGCA
TGCCCTACAA AGGTGTGTAC AGACGGCAAG GCGCGCTTCG TGTACCGAAC GGTCAAAGCA
ATTGAAATCT GGACCAAGAT CATGCGCAAC ACCTACTATG GTGCTGAGCC GGGTGTGTTG
TTCATCGACC GCATTAACCA GGACAACAAC CTTCGTTACT GCGAAGTCAT CAAGGCTACG
AATCCCTGCG GTGAGCAAAC GCTGCCGCCG TATGGTTGCT GCTGCCTGGG ATCTCCCAAT
TTGACAAGGT TTGTGAGTAA TCCATTCACA CTGATGGCGT CCTTCGACTT CGACGGGCTG
TCTAAGGTGG TCGCGAAAGC GGTGGAAATG CTTGACAAGG TGTTGGACAA GACTCACTGG
CCCCTACCAC AGCAGGCCAG TGAGGCGGCC AACAAGCGTC GTATCGGACT CGGCCATTTT
GGCTTGGCCG ATGCGATGGC GATGTTGGGC ATTCGGTATG ACTCTCAACA GGGCGCCGAT
TTTGCTGCTC ACGTATCTGA GGTTCTGCGT GATTCGGCGT ACATGGCGTC TGTGAATCTG
GCCAAGACGT TGGGGGCGTT CCCGTTCTTC GATGCTGAAA AGTATCTGGA GGAGGGTACG
TTTGCCTCGC GTTTGCCCGA GAAGATCAAG GATGCGATTC GAATGTATGG AATCCGCAAT
TCGCACTTGT TGTCCATTGC GCCGACCGGG ACCATTTCGA TGGCCTTTGG TGACAACGCC
AGCTCGGGTA TTGAGCCCAT CTTTAGCCTG CGCCAGCAGC GCAACAAGAT GATGGCCGAT
GGCTCGCGCC AGATATTTGA GTTGGAAGAT TACGCCTACC GGCAGTTCAA ACTGTCCAAG
GGCGAAGATG CGAAGTCCGA TGTGTTTGTG ACGGCCATGC AAATGACTGT TGCTGACCAC
CTCCGGGTGC TGGGTGCAGT TGCTCCCTAC ATCGACAGCG CGATCAGCAA GACGGTGAAT
GTCCCAGCTG ACTATCCGTT TGAAGACTTC CAGCAGGTCT ACATGGACGC GTGGAGGATG
GGTTTGAAGG GCATTACGAC CTACAGGCCC AATGACATGA TCGGTGCTGT GCTGGTGTCT
GCAGATGATG CGGACAAAAA GGCGGCGGTG GCGACAGAGC AGGACTTGCG CCAGGATGAT
CCGGATCGCC GTGTTGTGCT CAAAGATGTG CAAAACATCA ATGACGTGAT GCGCTGGCCT
GATCGCCCGG ACGTGAACCC GGAAGGTATT ACTTACCGTG TGAAGCATCC GCAAGGTAGC
TTTGCAGTGG TGGTGAACCA CTTCCGCAAT GGACACCTGC ACCCTCTGGA GGTGTTTGTT
GCAGGTGCTG AGCAGCCACG TGGGCTGGCA GCGATCGCGA AGTCCTTGAG CGTGGATAGC
CGATGCATAC CGTGTCTCCC ATCACCTTGC CAGTTACCTG TGCGGAATTT GTGGAGCTCT
CCAGTGGAGC ACTGGTTTGG CGGTGGTTAT TTGCTATGCG GTGATCGAAT CGTCCGGAGG
CCCGTAGGTG CTTTGCTGGT CGGCGATGTC GTCATAGGCC GGATGGAACC CGTCACCGGC
CATGTCGGCC TTTAG
|
|---|
| Protein sequence | MKTNDSNLSV PQALQQLCYD VLLEKYAAPG ESSVREIQER VATSLADDKA QQARFVSAQA
GGFVPGGRIN SAAGMDRVST MINCFVQPVG DSMSGSNQDG QPGIMDALRE SAETMRRGGG
VGYDFSSIRP VGARVKGTDS KASGPVSYMR VFDRMCQTVE SAGARRGAQM GVMRVDHPDI
EMFIDAKKTP DFSQMGLDKK DADGLLDLVR KNQGFGWSLR SAFATLSNFN ISVAVTDEFM
NAVVNDSDFD LVHDAEPVEA CPTKVCTDGK ARFVYRTVKA IEIWTKIMRN TYYGAEPGVL
FIDRINQDNN LRYCEVIKAT NPCGEQTLPP YGCCCLGSPN LTRFVSNPFT LMASFDFDGL
SKVVAKAVEM LDKVLDKTHW PLPQQASEAA NKRRIGLGHF GLADAMAMLG IRYDSQQGAD
FAAHVSEVLR DSAYMASVNL AKTLGAFPFF DAEKYLEEGT FASRLPEKIK DAIRMYGIRN
SHLLSIAPTG TISMAFGDNA SSGIEPIFSL RQQRNKMMAD GSRQIFELED YAYRQFKLSK
GEDAKSDVFV TAMQMTVADH LRVLGAVAPY IDSAISKTVN VPADYPFEDF QQVYMDAWRM
GLKGITTYRP NDMIGAVLVS ADDADKKAAV ATEQDLRQDD PDRRVVLKDV QNINDVMRWP
DRPDVNPEGI TYRVKHPQGS FAVVVNHFRN GHLHPLEVFV AGAEQPRGLA AIAKSLSVDS
RCIPCLPSPC QLPVRNLWSS PVEHWFGGGY LLCGDRIVRR PVGALLVGDV VIGRMEPVTG
HVGL
|
|---|
| |