Gene Bpro_5204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5204 
Symbol 
ID4016009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007949 
Strand
Start bp309449 
End bp310297 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content64% 
IMG OID637944832 
Productintegrase catalytic subunit 
Protein accessionYP_551964 
Protein GI91791013 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.184454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.989225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGATTG CCCCATCGGG ATACCGGCGC CATGCCGCGC AGCAAAGAGA CCCGGCACTG 
CGCTGCGCAC GCGTGCAGCG TGATGACACT CTGGCGCCAG AGATTGAGCG GGTCTGGCAA
GCCAACATGC GGGTCTACGG TGCTGACAAG GTCTGGAGGC AGTTGAGGCG TGAAGGCATG
GCGGTGGCCC GCTGCACGGT GGAGCGGCTC ATGCGCCGCT CGGGTCTGCA GGGTGTGCGC
CGAGGCAAGG TCGTACGCAC GACCATCAAC GATGCAGCCG CTGCCCGCCC GCTGGACCGG
GTCAATCGGC AATTCAAGGC CGAGCGACCC AACCAGCTGT GGGTGTCGGA CTTCACCTAT
GTCTCGACCT GGCAAGGCTG GCTGTACGTG GCCTTCGTCA TCGACGTGTT CGCCCGGCGC
ATCGTGGGCT GGCGGGTCAG CAGCTCCATG CGAACGGACT TCGTGCTCGA TGCGCTGGAG
CAGGCGCTGT ACGCCCGGCA GCCCGATGCA GACGATGCGC TGATCCATCA CAGCGACAGG
GGCTCGCAAT ACGTTTCGAT CCGCTACAGC GAGCGTCTGG CCGAAGCGGG CATCGAGCCG
TCTGTGGGCA GCAAAGGCGA CAGCTATGAC AACGCCCTGG CCGAGACGAT CAACGGCTTG
TACAAGGCCG AATTGATCCA CCGCCGGGCA CCCTGGAAGA CCAAGGAGGC TGTGGAACTG
GCAACCCTGG AGTGGGTGGC ATGGTTCAAC CACCACCGGC TACTGGAGCC CATCGGCTAC
ATTCCTCCTG CCGAAGCTGA GGAAAATTAC TATCGGCAAC TCGCCAGTCA GTCCGTCACA
CCGGTCTGA
 
Protein sequence
MQIAPSGYRR HAAQQRDPAL RCARVQRDDT LAPEIERVWQ ANMRVYGADK VWRQLRREGM 
AVARCTVERL MRRSGLQGVR RGKVVRTTIN DAAAARPLDR VNRQFKAERP NQLWVSDFTY
VSTWQGWLYV AFVIDVFARR IVGWRVSSSM RTDFVLDALE QALYARQPDA DDALIHHSDR
GSQYVSIRYS ERLAEAGIEP SVGSKGDSYD NALAETINGL YKAELIHRRA PWKTKEAVEL
ATLEWVAWFN HHRLLEPIGY IPPAEAEENY YRQLASQSVT PV