| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5194 |
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| Symbol | |
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| ID | 4015999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 298611 |
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| End bp | 300188 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637944822 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_551954 |
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| Protein GI | 91791003 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.471073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTTG CAAAGAACTA CATGCCCGCC TTAAGGATCA ACATGCGCAA ACTCAAAGAC
GCCCTGCGTC TCAAATTCGA CGGTGGGCTT TCCCACCAAC AAATCGCGGG TGCCCTGGGC
ATCTCCAAAG GTGTTGTCAC CAAGTACGTG GGTCTGGCTG TCGCCGCTGG GCTCGATTGG
GTGGCCATTG CCGCCATGGA CGAAGCCGCG CTGGAGCGAT GCCTGCTGGC ATCGCCTCGC
CCCAGCGACA TCTATGCCCA AGCCGACTAC GGGCGAATCC ACCAGGAGCT GGGCCGCAAG
GGCGTCACGC TCATGCTGCT GTGGGAGGAA TACTGCGCCC AGGTCGGCGA CGAGCACAGC
GCCGACAACC CCATCAAGCC CTGGCGCTAC TCGCAGTTCT GCGAGAACTA CCGCCAGTTT
GCCAAACGCC TCAAGCGCTC CATGCGGCAA GTCCACCGCG CTGGCGAGAA GCTGTTCATC
GATTTTGCTG GCCCCACCAT CACGCTCATG GTGCAGGGCC AAGAGGTGGG ACGGGCCAAC
ATCTTCGTGG CTGCCATGGG CGTTTCGGGC TACTGCTTTG CCTGTGCCAC GCCCACGCAA
ACTGGCCGCG ACTGGCTGGG CGCAACAGCA CAGGCCTTGA GCTTTTGTGG TGGCGTGCCC
CAGCTCATAG TCCCAGACAA CCCACGCGCC CTGGTGAGCA AGGCCGAGCG TTACGAGCCG
CTGCTGACAG ACAGCGTGCG AGACTTCGCC CGCCACTACG GCTGCTCGGT CTTGCCCGCA
CGCGCCTACC ACCCGCAGGA CAAGCCCAAG GTCGAACTCA GCGTGCTGCT GGTGGAGCGC
TGGATACTGG CACGCCTGCG CAAAATTCAA TTCACCAGTG TGGAGGAAGT CAACGACGCC
ATTGCCCCCT TGCTGCACTG GCTCAACCAG CGCGCCTTTC AAAAGCTGCC AGGCAGCCGC
GCCAGCGTGT TTGCCCAAAT CGACGCCCCG GCCCTGATGG CCTTGCCGGT GCAGCCCTGG
GAATGGGCGG TCTTCAAGAC CGTGCGCGTG CACATTGACA GCCACGTCGA ATTTGAAGGC
CACCGCTACA GCGTGCCCAA CGCCCTGGTT GGCCTGGCGC TGGAGCTGCG AGTGACCGCC
CATGCGATAG AGGCCTTGCA CCGTGGCAAC CGTGTTGCCA GCCACATGCG CTGCGCCCAC
AAAGGCGGTT TCACCACCGT GACCGAGCAC TTGCCCGAAC GCCACCAACA CCAGGCCCAG
TGGACGCCCG AGCGGCTGGT GGTCTGGGGC GAACGTATTG GCGTGGCCTG TGCTGCCACG
GTGCAAAGAA TGCTGGAGCG CCAGCGCCAC CCCGAGCATG CCTACCGTGC CTGCCTGGGC
CTGCTGTCTT TGAGCAAACG CTACGGCGAT ACCCGGCTGG AGGCGGCGTG CACCTTGGCG
TTGAGCCTGG GCACCAGCAA ATACACCCAC ATCCGCGACA TCTTGCTCAA CCGGCGCGAC
CTGCTGCAAA CCCACACGCC CCCTGAATGG ACCAGCCCGA CACATGCCCA TGTGCGTGGC
GCCAATTACT ACCAATGA
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| Protein sequence | MLFAKNYMPA LRINMRKLKD ALRLKFDGGL SHQQIAGALG ISKGVVTKYV GLAVAAGLDW
VAIAAMDEAA LERCLLASPR PSDIYAQADY GRIHQELGRK GVTLMLLWEE YCAQVGDEHS
ADNPIKPWRY SQFCENYRQF AKRLKRSMRQ VHRAGEKLFI DFAGPTITLM VQGQEVGRAN
IFVAAMGVSG YCFACATPTQ TGRDWLGATA QALSFCGGVP QLIVPDNPRA LVSKAERYEP
LLTDSVRDFA RHYGCSVLPA RAYHPQDKPK VELSVLLVER WILARLRKIQ FTSVEEVNDA
IAPLLHWLNQ RAFQKLPGSR ASVFAQIDAP ALMALPVQPW EWAVFKTVRV HIDSHVEFEG
HRYSVPNALV GLALELRVTA HAIEALHRGN RVASHMRCAH KGGFTTVTEH LPERHQHQAQ
WTPERLVVWG ERIGVACAAT VQRMLERQRH PEHAYRACLG LLSLSKRYGD TRLEAACTLA
LSLGTSKYTH IRDILLNRRD LLQTHTPPEW TSPTHAHVRG ANYYQ
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