| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5173 |
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| Symbol | |
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| ID | 4016017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 280579 |
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| End bp | 281145 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637944804 |
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| Product | alkylhydroperoxidase AhpD core |
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| Protein accession | YP_551936 |
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| Protein GI | 91790985 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.448187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAAAA TTGCTGCTCT AAAGCCGGAA CAGGTGCCGG CCGATTCGAA ACCGACTCTC
GATGCATTCA GCAAGAATCT CGGGTTCCCC CCAAATATGC TAGCGACTTT CGCGCAGAGC
CCGATCGCGT TCAACGCATG GGCCACCTTC CGCAGCTCCT TGAACAAGGC GCTCGACATG
AAGACGCGTG AAGCCATAAG TCTCATTGTT TCCGAGGTGA ATGACTGCAA CTACTGCCTA
GCGGTTCACA CCTACGCAGC CAATATGGCC AAGATGCCGG CCGACGAAAT CATCCTCGCC
CGGGAGGGCC ATGCCTCCGA CCCGAAGCGC GACGCCGCCG TCCAGTTTGC GCGCAAAGTT
ATCGAGACGC GCGGCCAACT CAATGACGCC GATGTTAAAG ACGTCCGCGA TGCCGGCTAT
ACGAATGCGA ACGTCATGGA GATTGTCGCG CCGGTGGCCA TGTTCTCTCT GACAAACCTT
TTCAATAACG TGTTTGATCC CGAGAAGGAC TATCCACCCG TTCCGCCGGC TGGCTCGATG
TCGAGAAGTT CAGGAGAAAG AAAGTGA
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| Protein sequence | MPKIAALKPE QVPADSKPTL DAFSKNLGFP PNMLATFAQS PIAFNAWATF RSSLNKALDM
KTREAISLIV SEVNDCNYCL AVHTYAANMA KMPADEIILA REGHASDPKR DAAVQFARKV
IETRGQLNDA DVKDVRDAGY TNANVMEIVA PVAMFSLTNL FNNVFDPEKD YPPVPPAGSM
SRSSGERK
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