Gene Bpro_5143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5143 
Symbol 
ID4016065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007949 
Strand
Start bp253088 
End bp254626 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content58% 
IMG OID637944776 
Productintegrase catalytic subunit 
Protein accessionYP_551908 
Protein GI91790957 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.1652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTCGT ACGAAGACAG GATTCGAGCG GTCGAGCTCT ACATCAAGCT CGGCAAACGC 
GTGAGGCCAA CCATCCGTCA GCTGGGTTAC CCAACCAAGA ATGCTTTGAA GGGCTGGTAC
CGGGAATATG AGCAACGGAT CGATTTGCCG GTGGGCTATG CGGGCCGGGA ACCCAAGTAC
TCGCAGGCGC AGAAGGAGGC AGCTGTTGAG CACTACCTCA CTCACGATCG ATGCATTGTC
GCTACCATGA GGGCGCTGGG CTACCCCGGT CGTGGGACAT TGACCGCTTG GGTTCGCGAG
GCGCTTCCTG AGAGCAGGAA AGCCGTAGTT GGCAGCGTTG GGCGCCGAAG GTATCCCGAG
TCGATGAAGC AGGCCGGGGT CATCGAGCTT TGCACCCGAC GAGAAACTGC GCAGGCTGTG
GCTGAAAAAT TAGGCGTGTG CAGGCCGACG TTGTACAACT GGAAGAACCA GCTACTTGGC
CGTGAGGCTC CCGCATCCAT GAAACACAGC AACAACTCAC CGCCAATGCC CGAACGGGCG
GAGCTGGAGC GCCAGCTCGA ATCACTACAA CGCGACATCC GGCAACTGCA GCTCGAACGC
GATCTCTTGA AGAAGGCCAA TGAAATAATA AAAAAAGGCC TGGGCGTCGA TCTGCAACTC
CTGACCAACC GGGAGAAGAC ATTGCTGGTT GGCGCCCTCA ATGAGCTCTA TGCCCTGCCA
GAGCTCCTTG CTCAGTTGGA CCTGGCGCGC AGCTCGTACT TCTACCATCG AGCCCGTGTA
AAGGTGGCAG ACAAGTACCT TGCAGTGCGG CAAACCCTCA CCGACATCTT CGAGCTGAAC
CACCGCTGTT ACGGCTACCG CAGGCTGCAG GCTTCGTTGA CCAGGCAGCG CGTCACCATC
TCTGAGAAGG TCGTGCAGCG GTTGATGAAA CAAGAGAGCT TGGTCGTTGC CAAGCCTAAG
CGGCGTCGGT ACGGCTCCTA CCTGGGCGAA ATCAGCCCAG CGCCCGAGAA CCTCATCAAT
CGCGACTTCC ACGCAGCGGC CCCGAACGAG AAGTGGCTCA CCGACATCAC AGAGTTCCAG
ATCCCGGCCG GCAAGGTGTA TCTATCGCCT ATCATCGACT GCTTCGATGG CCTGGTCATC
AGCTGGACCA TTGGGATGCA TCCCGACGCT GAGCTCGTCA ACACGATGCT GGATGCAGCC
ATCGAGACGG TGGCCGGCGG CAATGACCGG CCCGTCGTCC ACTCCGATCG TGGCGCCCAC
TATCGCTGGC CGGGCTGGCT CTCGCGGATC GGAGATGCGA AGCTCATTCG CTCGATGTCG
CGCAAGGGGT GTTCGCCTGA CAACGCTGCA TGCGAAGGCT TCTTCGGACG GCTGAAAACG
GAACTGTTCT ACCCTCGGGA CTGGAAGACC ACTACCATTG AGCAGTTCAT TGAGGTAGTC
GATTCCTACA TCCGCTGGTA CAACGAGAAG CGGATCAAGA TCTCTCTTGG CTCTCTTAGC
CCCATCGAAT ACCGAGAGAG TCTTGGATTT ACGGCATAA
 
Protein sequence
MCSYEDRIRA VELYIKLGKR VRPTIRQLGY PTKNALKGWY REYEQRIDLP VGYAGREPKY 
SQAQKEAAVE HYLTHDRCIV ATMRALGYPG RGTLTAWVRE ALPESRKAVV GSVGRRRYPE
SMKQAGVIEL CTRRETAQAV AEKLGVCRPT LYNWKNQLLG REAPASMKHS NNSPPMPERA
ELERQLESLQ RDIRQLQLER DLLKKANEII KKGLGVDLQL LTNREKTLLV GALNELYALP
ELLAQLDLAR SSYFYHRARV KVADKYLAVR QTLTDIFELN HRCYGYRRLQ ASLTRQRVTI
SEKVVQRLMK QESLVVAKPK RRRYGSYLGE ISPAPENLIN RDFHAAAPNE KWLTDITEFQ
IPAGKVYLSP IIDCFDGLVI SWTIGMHPDA ELVNTMLDAA IETVAGGNDR PVVHSDRGAH
YRWPGWLSRI GDAKLIRSMS RKGCSPDNAA CEGFFGRLKT ELFYPRDWKT TTIEQFIEVV
DSYIRWYNEK RIKISLGSLS PIEYRESLGF TA