Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5143 |
Symbol | |
ID | 4016065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007949 |
Strand | - |
Start bp | 253088 |
End bp | 254626 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637944776 |
Product | integrase catalytic subunit |
Protein accession | YP_551908 |
Protein GI | 91790957 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.1652 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTTCGT ACGAAGACAG GATTCGAGCG GTCGAGCTCT ACATCAAGCT CGGCAAACGC GTGAGGCCAA CCATCCGTCA GCTGGGTTAC CCAACCAAGA ATGCTTTGAA GGGCTGGTAC CGGGAATATG AGCAACGGAT CGATTTGCCG GTGGGCTATG CGGGCCGGGA ACCCAAGTAC TCGCAGGCGC AGAAGGAGGC AGCTGTTGAG CACTACCTCA CTCACGATCG ATGCATTGTC GCTACCATGA GGGCGCTGGG CTACCCCGGT CGTGGGACAT TGACCGCTTG GGTTCGCGAG GCGCTTCCTG AGAGCAGGAA AGCCGTAGTT GGCAGCGTTG GGCGCCGAAG GTATCCCGAG TCGATGAAGC AGGCCGGGGT CATCGAGCTT TGCACCCGAC GAGAAACTGC GCAGGCTGTG GCTGAAAAAT TAGGCGTGTG CAGGCCGACG TTGTACAACT GGAAGAACCA GCTACTTGGC CGTGAGGCTC CCGCATCCAT GAAACACAGC AACAACTCAC CGCCAATGCC CGAACGGGCG GAGCTGGAGC GCCAGCTCGA ATCACTACAA CGCGACATCC GGCAACTGCA GCTCGAACGC GATCTCTTGA AGAAGGCCAA TGAAATAATA AAAAAAGGCC TGGGCGTCGA TCTGCAACTC CTGACCAACC GGGAGAAGAC ATTGCTGGTT GGCGCCCTCA ATGAGCTCTA TGCCCTGCCA GAGCTCCTTG CTCAGTTGGA CCTGGCGCGC AGCTCGTACT TCTACCATCG AGCCCGTGTA AAGGTGGCAG ACAAGTACCT TGCAGTGCGG CAAACCCTCA CCGACATCTT CGAGCTGAAC CACCGCTGTT ACGGCTACCG CAGGCTGCAG GCTTCGTTGA CCAGGCAGCG CGTCACCATC TCTGAGAAGG TCGTGCAGCG GTTGATGAAA CAAGAGAGCT TGGTCGTTGC CAAGCCTAAG CGGCGTCGGT ACGGCTCCTA CCTGGGCGAA ATCAGCCCAG CGCCCGAGAA CCTCATCAAT CGCGACTTCC ACGCAGCGGC CCCGAACGAG AAGTGGCTCA CCGACATCAC AGAGTTCCAG ATCCCGGCCG GCAAGGTGTA TCTATCGCCT ATCATCGACT GCTTCGATGG CCTGGTCATC AGCTGGACCA TTGGGATGCA TCCCGACGCT GAGCTCGTCA ACACGATGCT GGATGCAGCC ATCGAGACGG TGGCCGGCGG CAATGACCGG CCCGTCGTCC ACTCCGATCG TGGCGCCCAC TATCGCTGGC CGGGCTGGCT CTCGCGGATC GGAGATGCGA AGCTCATTCG CTCGATGTCG CGCAAGGGGT GTTCGCCTGA CAACGCTGCA TGCGAAGGCT TCTTCGGACG GCTGAAAACG GAACTGTTCT ACCCTCGGGA CTGGAAGACC ACTACCATTG AGCAGTTCAT TGAGGTAGTC GATTCCTACA TCCGCTGGTA CAACGAGAAG CGGATCAAGA TCTCTCTTGG CTCTCTTAGC CCCATCGAAT ACCGAGAGAG TCTTGGATTT ACGGCATAA
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Protein sequence | MCSYEDRIRA VELYIKLGKR VRPTIRQLGY PTKNALKGWY REYEQRIDLP VGYAGREPKY SQAQKEAAVE HYLTHDRCIV ATMRALGYPG RGTLTAWVRE ALPESRKAVV GSVGRRRYPE SMKQAGVIEL CTRRETAQAV AEKLGVCRPT LYNWKNQLLG REAPASMKHS NNSPPMPERA ELERQLESLQ RDIRQLQLER DLLKKANEII KKGLGVDLQL LTNREKTLLV GALNELYALP ELLAQLDLAR SSYFYHRARV KVADKYLAVR QTLTDIFELN HRCYGYRRLQ ASLTRQRVTI SEKVVQRLMK QESLVVAKPK RRRYGSYLGE ISPAPENLIN RDFHAAAPNE KWLTDITEFQ IPAGKVYLSP IIDCFDGLVI SWTIGMHPDA ELVNTMLDAA IETVAGGNDR PVVHSDRGAH YRWPGWLSRI GDAKLIRSMS RKGCSPDNAA CEGFFGRLKT ELFYPRDWKT TTIEQFIEVV DSYIRWYNEK RIKISLGSLS PIEYRESLGF TA
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