Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5126 |
Symbol | |
ID | 4016087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007949 |
Strand | + |
Start bp | 237960 |
End bp | 239126 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637944759 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_551891 |
Protein GI | 91790940 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.189049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA AGTTTGCAGC CCTTATCCTA CTGGCGTCAT TTGCCAACGC TGTGCTCGCA GCGGACAACG TGAAGATTGG ATTCCTCAGC ACCTTGTCCG GACCGATCGC ATCACTCGGC CTCGAGATCC GCGATGGTTT CAACCTGGCG CTGAAAAACA GCGGCAATAA AGTAGGCGGA CTGCCCGTAG AGGTTGTGTT CGGTGACGAC CAGGCCAGCC CCGATGTCGG CAAACAGCTC GCCGACAAGA TGATCAAGCG CGACAAGGTC GACTTCATGA CCGGCGTTGT TTACTCCAAC GTAATGCTCG CGGTCGGACC ACCGACCTTT GCCGCGCAGA CCTTCTATAT CAGCTCGGCG GCCGGTCCGG CCGCGCTGGC GGGCGAGCGC TGCAACAAGT TCTTCTTCGG GCTGTCCTGG CAGAACGACG GGCAAAGCGA GGCGGTCGGC GAATACATGA CGACCAAAAA CTACAAGAAT GTGTTCATCA TTGCGCCCAA CTACACCGGC GGCAAGGAAA ACCTCGAAGG CTTCAAACGC TTCTTCAAGG GCAAGATCAG CGGCGAAGTC TATGTGAAGC TTGGTCAGCT CGATTTCGCC TCCGAACTGG CGCAGGTTCG CGCCGCCAAA CCCGATGCCG TCTTTTTCTT TCTACCGGGT GGCATGGGCA TCAACTTCAT CAAGCAGTAC GTTGGCGCCG GACTGGACAA GCAGATTCCC TATTTTGTGC CGGGATACTC GGCTGACGAA GACACCATCG CCGCGGTGGG CGATCCGATC GTGGGCCTGA AAAACGGATC GCACTGGGCT TGGGACCTGA AGAACCCGCA GAACGAAAAG TTTGTCGCCG ACTTCAAGAA GGAATACGGC CGCATTCCCA CCATGTATGC ATTCCAAGGC TACGACGTGG TGCGGCTGCT CGACAGCGCT GTCAAGGATG TGAAGGGCAA CCTGAGTGAC AAGGAGGCGC TGCACAAAGC GCTGAAGACC ACCAACTTCG GATCTCTGCG CGGTAGTTTC AAGTTCAACA ACAACCAATT CCCGATGGAT ACCTTCTATC TTCGTGAAGT GCAGAAAGAC AGCAGCGGTC GCATTACCAA CAAGACCATC GGCACGATTT TCAGCAACCA CGCCGACGCC TATGCCGGTG AATGCAAGCT GAAATAA
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Protein sequence | MKTKFAALIL LASFANAVLA ADNVKIGFLS TLSGPIASLG LEIRDGFNLA LKNSGNKVGG LPVEVVFGDD QASPDVGKQL ADKMIKRDKV DFMTGVVYSN VMLAVGPPTF AAQTFYISSA AGPAALAGER CNKFFFGLSW QNDGQSEAVG EYMTTKNYKN VFIIAPNYTG GKENLEGFKR FFKGKISGEV YVKLGQLDFA SELAQVRAAK PDAVFFFLPG GMGINFIKQY VGAGLDKQIP YFVPGYSADE DTIAAVGDPI VGLKNGSHWA WDLKNPQNEK FVADFKKEYG RIPTMYAFQG YDVVRLLDSA VKDVKGNLSD KEALHKALKT TNFGSLRGSF KFNNNQFPMD TFYLREVQKD SSGRITNKTI GTIFSNHADA YAGECKLK
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