| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5122 |
|---|
| Symbol | |
|---|
| ID | 4016083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | - |
|---|
| Start bp | 234489 |
|---|
| End bp | 235337 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637944755 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_551887 |
|---|
| Protein GI | 91790936 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.184507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAGATTG CCCCATCGGG ATACCGGCGC CATGCCGCGC AGCAAAGAGA CCCGGCACTG
CGCTGCGCAC GCGTGCAGCG TGATGACACT CTGGCGCCAG AGATTGAGCG GGTCTGGCAA
GCCAACATGC GGGTCTACGG TGCTGACAAG GTCTGGAGGC AGTTGAGGCG TGAAGGCATG
GCGGTGGCCC GCTGCACGGT GGAGCGGCTC ATGCGCCGCT CGGGTCTGCA GGGTGTGCGC
CGAGGCAAGG TCGTACGCAC GACCATCAAC GATGCAGCCG CTGCCCGCCC GCTGGACCGG
GTCAATCGGC AATTCAAGGC CGAGCGACCC AACCAGCTGT GGGTGTCGGA CTTCACCTAT
GTCTCGACCT GGCAAGGCTG GCTGTACGTG GCCTTCGTCA TCGACGTGTT CGCCCGGCGC
ATCGTGGGCT GGCGGGTCAG CAGCTCCATG CGAACGGACT TCGTGCTCGA TGCGCTGGAG
CAGGCGCTGT ACGCCCGGCA GCCCGATGCA GACGATGCGC TGATCCATCA CAGCGACAGG
GGCTCGCAAT ACGTTTCGAT CCGCTACAGC GAGCGTCTGG CCGAAGCGGG CATCGAGCCG
TCTGTGGGCA GCAAAGGCGA CAGCTATGAC AACGCCCTGG CCGAGACGAT CAACGGCTTG
TACAAGGCCG AATTGATCCA CCGCCGGGCA CCCTGGAAGA CCAAGGAGGC TGTGGAACTG
GCAACCCTGG AGTGGGTGGC ATGGTTCAAC CACCACCGGC TACTGGAGCC CATCGGCTAC
ATTCCTCCTG CCGAAGCTGA GGAAAATTAC TATCGGCAAC TCGCCAGTCA GTCCGTCACA
CCGGTCTGA
|
|---|
| Protein sequence | MQIAPSGYRR HAAQQRDPAL RCARVQRDDT LAPEIERVWQ ANMRVYGADK VWRQLRREGM
AVARCTVERL MRRSGLQGVR RGKVVRTTIN DAAAARPLDR VNRQFKAERP NQLWVSDFTY
VSTWQGWLYV AFVIDVFARR IVGWRVSSSM RTDFVLDALE QALYARQPDA DDALIHHSDR
GSQYVSIRYS ERLAEAGIEP SVGSKGDSYD NALAETINGL YKAELIHRRA PWKTKEAVEL
ATLEWVAWFN HHRLLEPIGY IPPAEAEENY YRQLASQSVT PV
|
|---|
| |