| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5120 |
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| Symbol | |
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| ID | 4016081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 232403 |
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| End bp | 233512 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637944753 |
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| Product | mandelate racemase/muconate lactonizing enzyme |
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| Protein accession | YP_551885 |
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| Protein GI | 91790934 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.582918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.114753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA CAGATGTGAC CCTGACCTTG TTCGCCTGGG AAAATATTCC CGCCACCAGC
TATGGTGCCC ACACCGGGCG GTTTTCAGGC GAAAGCAAGC TCGGCCTGCT CGCGGTAACG
ACGGACCAGG GTGTGACGGG CCATGCCTTT CTGGGTTCGG CGTTTTATGC GGCGGACATG
GACGGCGCGA GCCTGATTCG CTACCTCAAG CCGCTTCTTC TCGGGCAGGA CCCGCTGGAC
CGTGAGCGTC TGTATAAGGC CATGTGGAAA CGCGTGCGCA CCACCACGGT CCGCGCCATC
GGCGCGGTAG ACATCGCGCT GTGGGACATC GCAGGCAAGG CGGCCGGACT GCCGATCCAC
CGGCTGCTCG GCTCTTACCG CGATCGCGTA CCGGCGTACA TCAGCTCCGC CGTCCTGGCG
AGCCCCCAGG CCTATGCCGA GGAAGCGCTC CATTACAAAT CGCTCAACAT GGCCGCCTAC
AAGATTCATC CGCCGCAAGC CTGGCGTGAT GACATCAAGG TCTGCGAGGC GGTGCGCAAG
GCGGTGGGCG ACGACTACCT GCTGATGCTC GATTCAGTCT GGAGCTATGA CTACGCCGCG
GCGCTGCGTG TGGGCCAGGC CATCGAGGCT TTGGGGTACT ACTGGTATGA AGATCCTCTC
GCCGATGCGG ATATCTACAA CTATGTCGAA CTGCGAAAAA AACTGCGTAT CCCGATCATG
GCAACCGAAT ACCCGGCGGG CGGGCTCGAC GCTTACGCCC CCTGGATCAT GGAGCGGGCC
ACCGACTTCC TGCGCGGCGA TGTGGCAGTC AAAGGCGGGA TCACCACACT GATCAAGACC
GCCCACCTGG CCGAAGCTTT TCACCTGAAT TACGAACTGC ATCACGGCGG GAACTCGCTC
AACAATTTCG CCAACCTGCA TGTGATCATG GCGATCCAGA ACACGGAGTT CTTCGAAGTG
CTGTTGCCGG CCGAATCGCA GAAATACGGC CTGCTCCAGG ATATCGTCAT CGACAGCGAC
GGCATGGTGT ATGCCCCGAC CGGCTCGGGC CTGGGTGCCA CGATAGACTT TGAGCTGATC
GAACGGAAAA AGCTCGCACT ATTAGCATAG
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| Protein sequence | MKITDVTLTL FAWENIPATS YGAHTGRFSG ESKLGLLAVT TDQGVTGHAF LGSAFYAADM
DGASLIRYLK PLLLGQDPLD RERLYKAMWK RVRTTTVRAI GAVDIALWDI AGKAAGLPIH
RLLGSYRDRV PAYISSAVLA SPQAYAEEAL HYKSLNMAAY KIHPPQAWRD DIKVCEAVRK
AVGDDYLLML DSVWSYDYAA ALRVGQAIEA LGYYWYEDPL ADADIYNYVE LRKKLRIPIM
ATEYPAGGLD AYAPWIMERA TDFLRGDVAV KGGITTLIKT AHLAEAFHLN YELHHGGNSL
NNFANLHVIM AIQNTEFFEV LLPAESQKYG LLQDIVIDSD GMVYAPTGSG LGATIDFELI
ERKKLALLA
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