| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5119 |
|---|
| Symbol | |
|---|
| ID | 4016080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | + |
|---|
| Start bp | 231397 |
|---|
| End bp | 232383 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637944752 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_551884 |
|---|
| Protein GI | 91790933 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.111845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACACGT TAACGAAGAG AGTTTTTCTG TCGCTTTGCC TTGGCACCAT GCTGAGCAGC
ATTGCTGTTG TTGCCACGGC GGCTGATGTT TTTCCGGAAC GATCGGTCCG CATCGTCGTG
CCCTATACGC CCGGCGGATT CAACGACACC TTGGCGCGCG TGGTCGGAGA GCGGCTGTCG
AAGATGTGGA ATCAGCCCGT GGTGGTTGAT AATCGCCCAG GCGGCAACAC CACCATTGGC
AATACCTTTG TGGCCAAATC ACCACCCGAT GGCTACACCG TCCTGATCAC GCCGCTGCCG
TTCTCGGCGC TTCCCGGCTT GTACGGGCCG CAGCTGCCCT ACGATGCCTT GAAGGATTTC
AGTCCCCTTG TCTGGGCGGG CAGTACGCAG AACGTACTGA CGGTGCGCAA CGATCTGCCC
GTCAACAGCG TCAAAGAGCT TCTGGACTAT GCCAAAAAGA ACCCGGGCAA GCTGAACTAC
GGCTCTACCG GTTCCGGTTC ATCGAATCAT TTGTCGATGG AACTGCTGAT GCGCATGACG
GATACCAAAA TGACGCACAT CCCGTATAAA GGCAGCGCGC CTGCTGTGCT GGCGATCATG
GGCGGCGAGA CCGACGTGTT CTTCGACAAC ATTCCGAATG TGCTGCCGCA CCTGAAGGCC
GGAAAAATGA AAGCCATTGC CGTTACGGGA ACACAACGTT CGGTGCTGTT CCCGTCCCTT
CCGACCATTG CGGAAGCAGG CGTTCCGGGC TATGAAGTCA ACGTGTGGTT CGGCATGCAA
TTACCTGCGG GAACGCCGAA ACCACTGGTC GACAGTATGA ACCGGGACAT CGTCCGCGTG
CTGAAAGAAC CAGAAATCAT CAAGAGATTC CGCGAGCAAG GCGTCGAAGT GGTTGCCAGC
TCACCCGCGG CATTCGGCCA GCTGGTGCAG GGCGAAGTAC TGAAATGGAC GCAAGTCATA
CGGGATGCCA ACATCAAGGT CGAATGA
|
|---|
| Protein sequence | MYTLTKRVFL SLCLGTMLSS IAVVATAADV FPERSVRIVV PYTPGGFNDT LARVVGERLS
KMWNQPVVVD NRPGGNTTIG NTFVAKSPPD GYTVLITPLP FSALPGLYGP QLPYDALKDF
SPLVWAGSTQ NVLTVRNDLP VNSVKELLDY AKKNPGKLNY GSTGSGSSNH LSMELLMRMT
DTKMTHIPYK GSAPAVLAIM GGETDVFFDN IPNVLPHLKA GKMKAIAVTG TQRSVLFPSL
PTIAEAGVPG YEVNVWFGMQ LPAGTPKPLV DSMNRDIVRV LKEPEIIKRF REQGVEVVAS
SPAAFGQLVQ GEVLKWTQVI RDANIKVE
|
|---|
| |