| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5113 |
|---|
| Symbol | |
|---|
| ID | 4016074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | - |
|---|
| Start bp | 224806 |
|---|
| End bp | 225630 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637944746 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_551878 |
|---|
| Protein GI | 91790927 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACG AGAAGAAACA GAACAGCACC CCGAAGCCGG TCGTCGAGCC GACGCTGGCA
GACCGGCTCA CCCTGGTCCT CGCCGAGCAG TTGCGCAGCG GCGTTTATCC GGTCAATGCC
CGCTTGCCGA CCGAAAGAAC GATGGCCGAG GAATTTGGCG TCAGCCGGAC TGTCGTTCGC
GAGGTGATTT CCCGACTGAA ATCCGAGGGG CTTGTCGAAA CCCGTCAAGG CAGCGGAACG
GCAGTACTGG ACCCGCAGTC CTCGGCAGCA TTCCGGCTCT CTTCCTCCGA AAATAATCCG
GCGGAAGGCG TGCTGCGCAT CATTGAATTG CGCTGCGGAA TCGAAGCTCA AATGGCCGCA
TTGGCCGCCA GGCGGCGTAC CGCTTCCGAG ATGGCGGAGA TCAAGCACGC GCTGAAGATG
ATCGACCGGG CGGTGGCCAA CGGCGGCGAC GGCGTCAAGG AGGATCTTGA GTTTCATATG
GCAATTTCCC GCGCGACCAG GAATCCCCAT TACACGGATC TGCTGGGCAT GCTCACCCGT
GCGCTGAAGG ATGCCATCCG GGTGACGCGC AGCAATGAGG CGCGCCGTGC GGATTTCACC
GCGCAGGTGC GCGCCGAGCA CGAGGCCATC AGCGCGGCAA TCCTTGCGCG GGATCCCGAA
GCCGCGCGCG TGGCTGCTCT GCGACACATG GAGAGTACCG TCGCCCGGAT CGAACTCGCG
GAGGCAGGCT TCTGGACCGG GGAAAGACGC GACACGGCTC AGCGCCTGGC ACGCACTGAT
CTCAAGACCG TGCTGGACGC GCCACAGACG ATGCCGATTT CGTGA
|
|---|
| Protein sequence | MSNEKKQNST PKPVVEPTLA DRLTLVLAEQ LRSGVYPVNA RLPTERTMAE EFGVSRTVVR
EVISRLKSEG LVETRQGSGT AVLDPQSSAA FRLSSSENNP AEGVLRIIEL RCGIEAQMAA
LAARRRTASE MAEIKHALKM IDRAVANGGD GVKEDLEFHM AISRATRNPH YTDLLGMLTR
ALKDAIRVTR SNEARRADFT AQVRAEHEAI SAAILARDPE AARVAALRHM ESTVARIELA
EAGFWTGERR DTAQRLARTD LKTVLDAPQT MPIS
|
|---|
| |