| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5109 |
|---|
| Symbol | |
|---|
| ID | 4016109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | + |
|---|
| Start bp | 219392 |
|---|
| End bp | 220384 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637944742 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_551874 |
|---|
| Protein GI | 91790923 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.187279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCACAA GCCACGATAT CGCCCGTCGG GCTGGCGTCT CGCAATCCAC GGTATCTCGC
GTACTAACCG GCAATACGAA AGTGCGCAAA GAAGCGCGGG AACTGGTATT GGCCGCAGTA
CGTGAATTGA AATACCGGCC GAACGGTGCT GCCCGTGCCA TGCGGACCAG TCAAACCGGG
AACATTGGCG TCGTTGTTTC GCGCCTAGCC AATCCACTGT ATCCAGAGAT GCTTCAGATC
TTGGGTCGAT GTCTCATGAG CGCTGGTTTC CGCATGGTTG TCTGGAATAC GGAAGAGATG
GGTGAAAAAG TGGCAGTAGA GGCCATTCGC GAAAGCCGGG TTGACGGCGC CATCATGACT
ACCGCGACCG CCGACTCGAC GGAGCTGTAT GAGGCGTTGC AAATGGATGT GCCGGTGGTT
CTCATAAACC GGGTAGTCGA AGGGTGGCGC TGTGATCAGG TCGCCAGCGA CAACCTGACT
GGCGGACGTC TTGTTGCCGA ATATCTTGCG AAGGCGGGCA AACGCCGCAT CGGAATGATA
GGTGGAAGCC CCCTTGCCAG TACGATTCGC GACCGTCAGG CAGGCTTTCG TCATGCGCTC
GCCGCTAGCG GGTTTCCGCT CGATGAAACA CGATGCATGC AAGTCGACAC GTTTTCCTAC
AGGACCGGCT TCGAGGCTGC GTCGCGTCTG CTTGAGCTCT CCGACCCGCC TGATGCAATT
TTCTGCGTCA ACGATGTCAT CGCTCTTGGG GCGAGAGATG CCGCTCGTGC CCGCGGCATC
GATGTTCCTT CCAGATTGTG GATTGTGGGA TACGACGATA TTGAAATGGC ATCTTGGCAC
GCCTTTGATC TGACGACGAT TCGACAGCCC TTGGTGCGAA TGACGGAAAC CGCGATCAGC
TTGCTTATCG AGCGCATTCG CGGCCACCAA GGGGACTGGC AGAACATCTG TCTGCCAAAC
GAACTCGTGA TTCGCGGGTC AACCGGTTGG TAG
|
|---|
| Protein sequence | MVTSHDIARR AGVSQSTVSR VLTGNTKVRK EARELVLAAV RELKYRPNGA ARAMRTSQTG
NIGVVVSRLA NPLYPEMLQI LGRCLMSAGF RMVVWNTEEM GEKVAVEAIR ESRVDGAIMT
TATADSTELY EALQMDVPVV LINRVVEGWR CDQVASDNLT GGRLVAEYLA KAGKRRIGMI
GGSPLASTIR DRQAGFRHAL AASGFPLDET RCMQVDTFSY RTGFEAASRL LELSDPPDAI
FCVNDVIALG ARDAARARGI DVPSRLWIVG YDDIEMASWH AFDLTTIRQP LVRMTETAIS
LLIERIRGHQ GDWQNICLPN ELVIRGSTGW
|
|---|
| |