Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5106 |
Symbol | |
ID | 4016106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007949 |
Strand | - |
Start bp | 215164 |
End bp | 216387 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637944739 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_551871 |
Protein GI | 91790920 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.912284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGAC CCTTATCCGG CATCAAGGTA CTTGATCTCA GTCGAATCCT CGCGGGGCCG TGGAGTACGC AGCTACTTTC CGATCTGGGT GCCGATGTGA TCAAGGTCGA ACGACCCGCC GGCGGAGACG ATACCAGAGG GTGGGGACCG CCCTTTCTGG CACGCGAGGA TGGTTCGGCA ACGGCCGAAT CCGCCTATTT TCTCTCTGCC AATCGAGGCA AGCGGTCTAT CACCATCGAT ATCAGCACGC CGGAAGGCCA GGGCATTCTG CGCGAGTTGG CAAAGACAGT CGATGTGTTC GTGGAGAACT ACAAACTCGG CGACATGAAG CGCTATGGCC TGGATTACGC CGCACTCTGC GAAATCAATC CGGGCCTGGT TTACTGCTCG ATCACCGGTT TCGGCCAAAC CGGCCCCTAC AGCAGCCGAG CGGGCTACGA TTTCGTGATC CAGGCGATGG GCGGGCTGAT GAGCATCACC GGGCAAAGTG ACGACCAGCC CGGCGGGGGC GCCCAGAAAT GCGGCGTGCC GATCTCCGAT CTGATGACCG GCATGTACGC TTCGGTCGCC ATCGTCAGTG CGTTGTTCGA ACGAACCCGC AGCGGCAAGG GCCAGTACAT CGACATGAGC CTGCTCGACA CCCAGGTCTC CTGGCTCGCC AACCAGGCAT CCAACTACCT CGTATCGGGA AAGCCACCGA AGCGATGGGG TAATGCGCAT CCCAACCTCG CCCCCTACCA GTCCTTTGCC GCCAGCGATG GTGAGCTGAT CGTTGCTGTC GGGAATGACC GCCAATTCGC TGCGCTGTGC CGCACGCTCG GCGTAGAAGA ATTGACCCAT GATGAACGGT ACGCCACCAA CGCCCAGCGG CTGCAGCACC GCGCAACGCT CATTCCCGCC TTGTCTGAAT TGTTCGTCCG TGCATCTAAG AGGCACTGGC TGGATCAACT CGAACGCTCG GGGGTGCCAT GCGGTCCGAT CCAGTCCATT CCCGAAGCGC TGGCGGACGA GCACGTGCTG GCCCGCGGCA TGGTTTTTTC GCTGCCTCAT ACAAGCGGTG TCTCGGCCCC GCAAATCGCC AATCCCATCA AGTTTTCGAG ATCCAGCATC CACTATCGGC GTGCTCCCCC GGCGCTGAGC GAGCACACCG ACGAAATACT GACCACAGAA CTGGGTTGGT CCGCAGAAAG AATTGCCCAC TCCAAGAAAA AAGGAGTGAT TTGA
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Protein sequence | MAGPLSGIKV LDLSRILAGP WSTQLLSDLG ADVIKVERPA GGDDTRGWGP PFLAREDGSA TAESAYFLSA NRGKRSITID ISTPEGQGIL RELAKTVDVF VENYKLGDMK RYGLDYAALC EINPGLVYCS ITGFGQTGPY SSRAGYDFVI QAMGGLMSIT GQSDDQPGGG AQKCGVPISD LMTGMYASVA IVSALFERTR SGKGQYIDMS LLDTQVSWLA NQASNYLVSG KPPKRWGNAH PNLAPYQSFA ASDGELIVAV GNDRQFAALC RTLGVEELTH DERYATNAQR LQHRATLIPA LSELFVRASK RHWLDQLERS GVPCGPIQSI PEALADEHVL ARGMVFSLPH TSGVSAPQIA NPIKFSRSSI HYRRAPPALS EHTDEILTTE LGWSAERIAH SKKKGVI
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