| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5095 |
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| Symbol | |
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| ID | 4016095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | - |
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| Start bp | 208316 |
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| End bp | 209605 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637944732 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_551864 |
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| Protein GI | 91790913 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.57433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA TCCTGGGTAT TAGTTTTGTT GGGCTGATGG TGATCGGCCT TCCAATCGCC
TTCGCGATGC TGATCGCCGG ACTCGTTGCC ATCTGGATGA AACCGGGGCT GAGCGGGCTG
ATCGTCATCC AGAACCTGTT CAGCGGTCTG GACAGCTTTC CGCTGCTGGC GATTCCGTTC
TTCATCCTGG CCGCCGAACT CATGTCTGGC GGTGCGCTGA CCGACGTGCT GCTGCACTTC
GCGGCACGTC TTGTTGGCCG CCGGCGAGGT GGCTTGGGCC ATGCCAACAT CCTGACGCTG
ACCTTCTTCT CCGGGATCAG CGGCTCGGCA CTCGCCGATG CCGCAGGACC CGGCGCGATG
CTGATCAAGA TGATGCGCAA GGCGGGTTAC AGCGCGCCTT ACGCGGCAGC GCTCACGGCT
TCCACCGCCA TTGTTGGTCC CATCATCCCT CCTTCGATCA TCATGATCAT CTATGCGCTG
ACAGACAACA GCGTGACGAT TACCGGCCTC TTCCTGGCGG GTGTGGTGCC CGGACTGCTG
ATCGCGGGTT CCCTGGCCAT CGTTAACCAT ATCGTGAGCG TGCGTCGCAA CTATCGCTCC
GCGCCGGAGC TGCTGGACCC GTCGCCGATC CTGAGACTTT TCATACGGGC GCTGCCAGCA
TTGATGCTGC CTGCGATCAT CCTGGGCGGG ATCCACTTTG GGGTCTTCAC GCCAACGGAG
GCGTCCGCAG CAGCGGTGCT GTATGCCCTG CTGGTGGGCC GCTTTGTATA TGGCACGCTG
ACCATGGACA AGCTGCCTGC CATCTTGTTC CGCACGGCGC TGATGACATC ATCCATCCTG
TTTATCGTCG CTACGTCGGC GGTGTTCGCC TGGGTGCTGA CCGTGGGCCA GATCCCGCAG
ACCGTTGCGG CCTGGATCGC AGGCATGCAG CTGTCGCCGG GCATGCTGCT GCTGGCCATC
AATGTGCTGC TGCTGCTGGT GGGGATATTC ATCGAACCGC TTCCCGGCGT CATGATCATG
GTGCCCATCC TCGCGCCGCT GGCGGACGCT GCCGGCCTGA ATCCGCTGCA CTTCGCAATC
GTGGTGATCG TGAACCTCAC GCTCGGAATG ATCACGCCCC CGGTGGGCGG TCTGCTCTTC
GTTACTTCGA TTGTCTCTGG CGTCCAGATG GGGCCCATGG TGCGCGAAGG CCGGCCCATG
CTCGTCGCAC TGCTGATCGT GCTGGCGCTT CTCACTTTCT TCCCGGCTTT GTCCACCTGG
CTGCCGGGCC TGCTGGGCTA CAGGAACTAG
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| Protein sequence | MSAILGISFV GLMVIGLPIA FAMLIAGLVA IWMKPGLSGL IVIQNLFSGL DSFPLLAIPF
FILAAELMSG GALTDVLLHF AARLVGRRRG GLGHANILTL TFFSGISGSA LADAAGPGAM
LIKMMRKAGY SAPYAAALTA STAIVGPIIP PSIIMIIYAL TDNSVTITGL FLAGVVPGLL
IAGSLAIVNH IVSVRRNYRS APELLDPSPI LRLFIRALPA LMLPAIILGG IHFGVFTPTE
ASAAAVLYAL LVGRFVYGTL TMDKLPAILF RTALMTSSIL FIVATSAVFA WVLTVGQIPQ
TVAAWIAGMQ LSPGMLLLAI NVLLLLVGIF IEPLPGVMIM VPILAPLADA AGLNPLHFAI
VVIVNLTLGM ITPPVGGLLF VTSIVSGVQM GPMVREGRPM LVALLIVLAL LTFFPALSTW
LPGLLGYRN
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