| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5094 |
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| Symbol | |
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| ID | 4016094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | - |
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| Start bp | 207249 |
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| End bp | 208265 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637944731 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_551863 |
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| Protein GI | 91790912 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.122319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCCA AAAGACTCTC GCTACTGACA TTGGTCGCCG CCTTGGTGAC CGGCTTCGTT
GCCCTTCCGG CGCACGCCCA GAAGGTGCTC AAGTACGCGC ACTTCCAGCC CGCCAAGAAC
GACCAGCCCA AACATGTGGC GGCCGTGGCC TTCAAGGAGC ACGTCGAAAA GGCCACCAAT
GGCTCGATCA AGGTCGAAAT CTACCCCGCC GGCCAGCTGG GCACTGCGCA GCAGATGATG
GAAGGCCTGC GCTTGGGCAG TGTGGAGCTG GCGGTGGTTC ATGACGGCGG TATTCCCGGC
GTTTACAAGA CCTTCAACAT CTTCGGCCTG CCGTTCGTGT TCGACAACCA TGCGCACGCC
TACACCGTCC TGGACGGTCA GTTCGGCAAG GATCTGGCCG AGGACATGCG CAAAAAGACG
GGTATCCGCC TGATGGCCTA TGCGGACAAC GGGATTCGGC ATTTCACCAA TTCCAAGCGC
GCCATCCGGT CGCCTGATGA CATGAAGGGG ATGAAGATGC GCGTGCAGCC CAGCCCTGTG
TTCGTCAAGC TGGTCGAGTC CCTGGGCGCC AGCCCCACGG CCATCGATTG GGGCGAACTG
CCCGCAGCAC TGGCGCAAGG TACCGCCGAC GGCCAGGAAA ACGGTGTCAC CAACATCCTC
GCTGCCAGTC TGTACCAGCA CCAGAAACAT GTCACGCTTG ACGGACACGT CTACAGCCTG
CACGCGTATC TGGTCAGCGA CCGCTTCTTC AATGGTCTCA ATGACACCGA AAAGAAAGCC
GTGACCGAAG GCGTGGAGAA AGCCAAGAAG ATTCACCGCG ACATGACGCG CGAGCAGGAT
CTGTCGGCAA AGAAGGTGCT GACCGAGAAG GGCATGATCG TGACCGAGCT GAGCGCGGCG
GAAGTCGATC GTTTCCGCAA GGCATCCCAG CCGGTTGTGC GCAAGTACCT TGACGCTGAA
GTTAGCAAGG AATGGACCGA CAAGCTGGTC CAGGCTGCGG ACAGCACGCG CAAATGA
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| Protein sequence | MHSKRLSLLT LVAALVTGFV ALPAHAQKVL KYAHFQPAKN DQPKHVAAVA FKEHVEKATN
GSIKVEIYPA GQLGTAQQMM EGLRLGSVEL AVVHDGGIPG VYKTFNIFGL PFVFDNHAHA
YTVLDGQFGK DLAEDMRKKT GIRLMAYADN GIRHFTNSKR AIRSPDDMKG MKMRVQPSPV
FVKLVESLGA SPTAIDWGEL PAALAQGTAD GQENGVTNIL AASLYQHQKH VTLDGHVYSL
HAYLVSDRFF NGLNDTEKKA VTEGVEKAKK IHRDMTREQD LSAKKVLTEK GMIVTELSAA
EVDRFRKASQ PVVRKYLDAE VSKEWTDKLV QAADSTRK
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