| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5040 |
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| Symbol | |
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| ID | 4015914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 148984 |
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| End bp | 151182 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637944678 |
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| Product | phage integrase |
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| Protein accession | YP_551810 |
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| Protein GI | 91790859 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.346055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAA GGACCACCGT CTCGGGCCTG GTGGTGCTGG AGGCCCCGGC CGCCGGCGAT
CAAACCCTCC CCCTTAAAAA GAAGCGCGGC CGGCCCGTAG GCTGGCGCAT GCCCACCCTG
GCCGAACTCG ATCGACTCAC GTTGGAGGAT TTTTCGTTCG TGCGCGGCGT CATGAGCGGC
ATGAAACCTC ACGTAGCCTT CAAGCAGTTC TACGCGAACC GCCACTTCGA CGCCGACGGC
AAGCCGGTCA TCCCGCACGG CGCGGAGATC AACAGCCATG CCGAACGGCT GCAGCTCTCG
ATCCTCGCGG CCGCGCGCGC CTCCGACAAA CCTGAGGCTC GGGCAGCGGC GCTCGCCCTG
GAGCGCCCTA CTCCCGAACC CGCGGCAGCG CCGCCCGCCG TCGCGCAGGC CCACATGGAT
TACACCCAAT GGGCCGAATC GCAGCCTGAG GACATGTATT CTGAGAACGA GATGGTCGAG
CGCTACAAGG AATACCTCGC CGACCAAGGC GCCGCCGCCA GCGGGCACCA CGAAGTTGCG
GACCAGTCGC TGAGCGTCAA CGCCAAGGTC AAGGCTATCA ACGCGCTGCA GACGCAACTG
GCCACCCTTC CCCAGCCTGA CCATCCAACC AAGCTCTGGC TGGCCGCCTC GCTGGTCAAG
GCATTCACTC GCCGCGGTGT CACGACCATG GCCGGAGTGG TGCAGTCGAT TTCCGTTGCC
GGCCGGCACT GGCATCGCAG CATCAAAGGC CTTGGGCCCG GGCGCGCGGC GCGTATCGAA
GGCTGGCTCG ATGACCATGC CCACTCGCTG GGCGAGCTGC AGCGCCGCGG TCGGCACTGG
GATGTCGCTC CGCCGCTTGA GAAGGCCATC CTGCCCATGC AGCGGGCGCC CGCAGTCGCC
CTCCTCTCCT ACACGGCAGG CTCGGACACG GCGGCCTCGC TGTCGACCTC CCTAGTGCTG
CGCTCGGGAA TCGCGCCGCT GGAGCTGATG CTGATCCCCC CTGCGCTGGA CGGTCAGGTC
GGTATCTTCC GCACCCAGAC ACCGAACCAC CTGGGCGCGA AGACTGACAT TCAGGCCGTC
GGAGCCTGGC TCAACAGCTA CCTGGTTGCA GGCAAAAAGC GAACCTTTGA CGCCTACCGG
CGCGAGGTCG AGCGTTTCTA CATCTGGGCT GTGCTGGAAG CCCAGTGCGC CCTATCCTCG
ATCACCCTGA GCCTGGCTCA GCAGTACCAG GCGTTCCTGC AGGCTGTCCC GGATTGCTAC
ATCAGCACGG CGAGGGTCAC GCGCCATGAT CCTCGCTGGC GCCCCTGGCG CGGCCAGCTC
GAGCCATCCA GCCAAAACTA CGCTCTCGGC GTGCTTTACC AGATGTACCA AGCCCTTGGC
AAAAACGCCT ACGTGACTGG CAATCCGTTC GCCAGCATCC AGTACGACGC CGGCGGCATG
ACGCGCCACG CCATGGATGT CACGCGCAGC CTGCACGCCG ATGACCTGTA CCTCGTCCGT
GAAGCGCTTG CCGTCCTCCC GGGCCTTGAT TCTGACACCC TCCGCAAAGC CGCCCTCGCC
CGCCGGACCC GCTTGATCCT GCACCTCGCA CTTACGACCG GCATGCGCCT GGCCGAGATC
GCGTCCACGA GCCTGAGCAG CCTGGCCCAC CCTGTCGTCG ACGGACGGCC CGCAGAAGAT
TGGATTGTTA CGGTCTTGGG AAAGGGGCAG AAGAAGCGCG AAGTGCCTAT CAGCGAAAAG
CTGGTGAACA TGATTCAGGA GCACCATGCT GACTGGCGGG CCTTGATGAA GAACGACGCC
GCACGGATTG CCGCGTTCGA TCGCTCCCCT CCCCTCATCG CCGTCCTGGA GGCGCCGGTT
CGGGAGGGTG GCCGAACCAT CACGGATGAG ACCCAGCTCG CAAACGATAA TTCAGCGCTG
AGTTCGAATG GTCTCTATCG CACCTTGAAG ACGTTTTTCC GGCAGATGGC GAGGAAGGAG
CGGGACGCAG ATCTTCAGGC CCGCATCCTC AAGTTCAGCA CGCACTGGCT GCGCCACACC
TTCGCCCACG AAGTGCTGCG GGAGAACGAT AGCGATGAGG GGCTCAAGCT TGCCCAGCAG
CTTCTCGGGC ATGCATCGAT CAACACCACC GCCGAGTATG TCAAGCAGGA CCTGTCGGCC
AAGGTCAAGG CAGCCCGCAA GGTCAACCCG CTCGGATAA
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| Protein sequence | MTARTTVSGL VVLEAPAAGD QTLPLKKKRG RPVGWRMPTL AELDRLTLED FSFVRGVMSG
MKPHVAFKQF YANRHFDADG KPVIPHGAEI NSHAERLQLS ILAAARASDK PEARAAALAL
ERPTPEPAAA PPAVAQAHMD YTQWAESQPE DMYSENEMVE RYKEYLADQG AAASGHHEVA
DQSLSVNAKV KAINALQTQL ATLPQPDHPT KLWLAASLVK AFTRRGVTTM AGVVQSISVA
GRHWHRSIKG LGPGRAARIE GWLDDHAHSL GELQRRGRHW DVAPPLEKAI LPMQRAPAVA
LLSYTAGSDT AASLSTSLVL RSGIAPLELM LIPPALDGQV GIFRTQTPNH LGAKTDIQAV
GAWLNSYLVA GKKRTFDAYR REVERFYIWA VLEAQCALSS ITLSLAQQYQ AFLQAVPDCY
ISTARVTRHD PRWRPWRGQL EPSSQNYALG VLYQMYQALG KNAYVTGNPF ASIQYDAGGM
TRHAMDVTRS LHADDLYLVR EALAVLPGLD SDTLRKAALA RRTRLILHLA LTTGMRLAEI
ASTSLSSLAH PVVDGRPAED WIVTVLGKGQ KKREVPISEK LVNMIQEHHA DWRALMKNDA
ARIAAFDRSP PLIAVLEAPV REGGRTITDE TQLANDNSAL SSNGLYRTLK TFFRQMARKE
RDADLQARIL KFSTHWLRHT FAHEVLREND SDEGLKLAQQ LLGHASINTT AEYVKQDLSA
KVKAARKVNP LG
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