| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5024 |
|---|
| Symbol | |
|---|
| ID | 4015937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | + |
|---|
| Start bp | 121747 |
|---|
| End bp | 125355 |
|---|
| Gene Length | 3609 bp |
|---|
| Protein Length | 1202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637944662 |
|---|
| Product | ATPase-like protein |
|---|
| Protein accession | YP_551794 |
|---|
| Protein GI | 91790843 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA GAGACCTTTT TCTCAAGCCA ATCGACCGCC CCATCAATGG CGTCATCAAA
GCCGACCAAA TGGACGCCGC CAGCGTCTGG CAAGAGCTGG AAGAATACGT TGTCACCAAG
CAGATCAGCG ACTACCTGCG CCGCTTCTTT GACGCCTACC TTGCCGCCAT TGACCGCCCG
CATGACGCCG CCATCACCGA TCGCATGGGA GTCTGGGTTT CCGGTTTCTT CGGCTCGGGC
AAGTCCCACT TCATCAAGAT CCTGTCCTAC CTGCTGGAAA ACATGGAGGC CACCAATCCC
CAGACCGGGG AAAAGCGCCT TGCCAGCCAG TTCTTTGACC ACCAAAAGAT CAAAGACGCC
ATGCTGCTCG CCGACATCCA GCGTGCGGTG CAGGGCACGG CCGATGTCAT TCTGTTCAAC
ATCGACGCCA AAGCCGACAG CAAGTCCGAT CGCGATGCCA TCCTGCAAGT CTTTCTGCGG
GTCTTCAATG AAAAGCTGGG TTACTCGGGC GACTCACCTC ACATTGCCGA CATGGAGCGC
CACCTCGTCG CCAAGGGTGC CTACGACGCC TTCAAAGCAG CCTTTGCGGC GTCCAACGGC
AGCACCTGGG AACAAGAGCG TGACGCGGTT GATTTCCTGC GTGACGACGT GGTTGCCGCG
CTCGGGCAGG TCCTGAAGAT GACGCCAGAG TCCGCCAGCC AATGGTTTGA CCGTGCCCGC
GACGACTTCC GCATCAACAT TGAGGGCTTT GCCAAGGTGG TCAACGACTA CCTTGCGACC
CGCGCGGCTA AGCACAAGGT CATCTTTCTG GTCGATGAGG TGGGCCAGTT CATCGGGGCC
AATGCCCAGC TCATGCTCAG CCTGCAGACC ATCACCGAGC AGCTGGGCAC CCAGTGCAAG
GGCCGTGCCT GGGTCATCGT CACCAGCCAG GAAGACATCG ACGCAGCCAT CGGCGAAGCC
AACAAAGCCA GGTCGCAAGA TTTTTCCAAG ATTCAGGGGC GCTTTCATAC CCGGCTGTCC
CTGGCCAGCA GCAACACCGA TGAGGTCATA GGGGAGCGCC TGCTCGCTAA AACAGAGGCC
GCTCATGTCC TCCTGCGTGA TGACTTTGCG GGCAGGAGCG ATGTCATCAA TAATCAACTC
GGGTTTGCCG GCAATTCGGT CAGCTTGCGT GGTTATAAAG ACACGGCCGA GTTTGTCGCT
TGCTACCCGT TTGCCCCCTA CCAGTTCACG TTACTGCAGA AGATTTTTGA GTCCATCCGC
AAGGTGGGCG CCACTGGCAA ACACCTCTCG CGGGGAGAGC GTTCGCTGCT CGATGCCTTC
CAGTCTGCCG CCACGCGCAA TGCCGACCAC AGCACCGATG TGCTGGTCCC GCTGTACGAC
TTTTACCCGT CGATCGAGAG CTTCATTGAC GGGGTGGCCA AGCGCTCCAT TGATGAAGCT
CCGCTCAACC CCGCGCTGCA GCCCTATGAC AGCTTGCTCC TCAAAGCGAT GTTCCTCATC
CGTTATATCC CCGACATCGT CAAGCCAAAC ATCGACAACC TAGCCACCCT GTGCATTGAC
CAGATCGACG CCGACAAGCT CGCCCTAAAG CGCAAGATTC AGGAGAGTCT GGCCCGCCTG
GAGCAGCAGC GCCTGGTCAG CCGCAATGGT GACTTGTGGT TCTTCCTGAC CAACGAAGAG
CGCGATGTCG CACGCGAAAT TGGCCACGTT GATGTCTCCG CATCTGAAAA GTCCCGGCTG
CTCGCCGAGC TGATTTTTGA GGAAATCCTG GGCAACCAAG CGAAGGTACG TCACCAGGGC
ACCAAAGCCG ACTACGAGTT CAACCGCCTG CTCGATGGCG CTCCTTGGCG TCAGGCCAGT
CATGCCCTGA GCTTTGAAGT GCTGACCCCG CTGGGTGATG AGTACGACAA GCTCCAGCCC
GCCAAGTGCA TTTTGCGCAG CAGCGAGGGA GCAGGGCGCG CCATCGTCCG TCTGGCCGAG
GGTGAACGCC TCGACATCGA ACTGGCGCTC TACCTGCAAA TCGAAAAATA CATCGTCAGT
CCCAAGGCCG ACCATGCGAC CCCGTCGCTC AAGCGAATCC TGGCTGATCG AAAAGACGAA
AACCGCGAAC GCCGGATGCG CTTGGTGCAT CAGCTCTCAG ATCTCATGAC CACGGGCGAC
TTTTACGCCC TGGGCCAGCC GGTAGAGTTC AAGGCCGGCA GTCCCGCGAC GGTGCTTGAG
GCGCTGCTGA ACTACCTCAT TACCAATACC TACAGTAAGT TGCCTTACCT CAAGGTACGT
CAGGCCGACC CAATAGCCGA GATCAAGGCC GTGCTTAGCG CTGATGACCT GGGCCAGCAC
GCGCTGGGGC TAGACGGTGA TGCAGGCAAT GCGCTCGCCA TCAAAGAGAT GCGCGACTAC
CTGCAGCTGG CCGCCAGCCA AAATCGGGTG CTGTTGTCTG ATGTGGTGGA CCGTTTTGCC
GGCATTCCTT GGGGCTGGAA GCCTGAGTGG GAAACCGTGT TGCTCATCGC TCGTCTGTTC
ATGGCTGGCG AGATCAAACT CATGCTGGAA GGCTCTGACC TTGATCCCCA ATCGGCCGCA
GAGCCTCTGA CCAAGTCCGT CCGGTTCAAG CAGGTCTCCA TCCTCAAGCG AAAAACGGCA
GACGCCGGCG CCATCAGACG CGCCCGCGAG CTTTACAAGG ACCTGTTCAG CAAGCTCGGC
CGCGAAGAGG AAGACAGCCT GGTGGCCGAC TTCCGCGACC AATTCACTGA ATGGCAAGCT
GACCTCAAGA GCTACGCCCA TACCGCCGCC ACGCCCCATC ACCCGGGTAG GGCCGACATC
GATACCGCGC TGACCCGGAT TTCCCAGCAA CTCGCGGTTC GCGACAGCTT TGCATTCGTC
GAGGCGCTGC TGGACGCCAA AGAAGTCTGG CTGGATACTG CGGACGACAT CCACGACCTG
GTCCACTTTT ACAAAACCCA AATCACCGCC TGGCGCAAAC TGCTCGATGG CTTGCGGGCT
TTCGCAGACA ACCGTGAAGC CCTCGACAAG GTGCCGCAAG CCGCCGCTGC GCTCGCCGAG
CTGACCCAGA TTCGCGACAA TCCCAAGCCC TACGGGCAGA TCAATCGCAT CGAACCGCTG
GTCGCCGCTG TCACTGCCGT CAACGAGCAG CTCGCCCAGG CCCGTCGCGA AAAGGCCCTG
CTGTCCATCG ACGCCAAGAT TGCCGAGGTG CAAGCCAAGC TCGACGCCGT GGGTGCCACG
CCCGAGTTGA GCAATAAAGC CCTGCGCCCG CTGCAAGACC TCAAGACCCG CATTGCCAGC
CAGACCAGCA TTGCCCAGAT CCTGTACCTG CAGGGCCAGG GCGGCGACGC GATGGACGAC
GCAATCGCCC TCATCGAAGA GGCCATGGCA AAGCTCTCTG CGGCCACGGG TGGCACCGCG
AAACCCGTGC AGGCGGTCCA GCCTAATGTG GCCCCGCCGG TTGCAAAACC CACCCGCGTC
GTCCGCGCCG CAGAACTCTC CAGCAAGACC TATCTTGAAA CTGAAGCTGA CGTGGACGCC
TTTGTGGTCA AACTCAGGGC CGAGCTGCTG GCCGCCATTC ACTCTGGACA AATGGCGCGG
GTGCAATAG
|
|---|
| Protein sequence | MKIRDLFLKP IDRPINGVIK ADQMDAASVW QELEEYVVTK QISDYLRRFF DAYLAAIDRP
HDAAITDRMG VWVSGFFGSG KSHFIKILSY LLENMEATNP QTGEKRLASQ FFDHQKIKDA
MLLADIQRAV QGTADVILFN IDAKADSKSD RDAILQVFLR VFNEKLGYSG DSPHIADMER
HLVAKGAYDA FKAAFAASNG STWEQERDAV DFLRDDVVAA LGQVLKMTPE SASQWFDRAR
DDFRINIEGF AKVVNDYLAT RAAKHKVIFL VDEVGQFIGA NAQLMLSLQT ITEQLGTQCK
GRAWVIVTSQ EDIDAAIGEA NKARSQDFSK IQGRFHTRLS LASSNTDEVI GERLLAKTEA
AHVLLRDDFA GRSDVINNQL GFAGNSVSLR GYKDTAEFVA CYPFAPYQFT LLQKIFESIR
KVGATGKHLS RGERSLLDAF QSAATRNADH STDVLVPLYD FYPSIESFID GVAKRSIDEA
PLNPALQPYD SLLLKAMFLI RYIPDIVKPN IDNLATLCID QIDADKLALK RKIQESLARL
EQQRLVSRNG DLWFFLTNEE RDVAREIGHV DVSASEKSRL LAELIFEEIL GNQAKVRHQG
TKADYEFNRL LDGAPWRQAS HALSFEVLTP LGDEYDKLQP AKCILRSSEG AGRAIVRLAE
GERLDIELAL YLQIEKYIVS PKADHATPSL KRILADRKDE NRERRMRLVH QLSDLMTTGD
FYALGQPVEF KAGSPATVLE ALLNYLITNT YSKLPYLKVR QADPIAEIKA VLSADDLGQH
ALGLDGDAGN ALAIKEMRDY LQLAASQNRV LLSDVVDRFA GIPWGWKPEW ETVLLIARLF
MAGEIKLMLE GSDLDPQSAA EPLTKSVRFK QVSILKRKTA DAGAIRRARE LYKDLFSKLG
REEEDSLVAD FRDQFTEWQA DLKSYAHTAA TPHHPGRADI DTALTRISQQ LAVRDSFAFV
EALLDAKEVW LDTADDIHDL VHFYKTQITA WRKLLDGLRA FADNREALDK VPQAAAALAE
LTQIRDNPKP YGQINRIEPL VAAVTAVNEQ LAQARREKAL LSIDAKIAEV QAKLDAVGAT
PELSNKALRP LQDLKTRIAS QTSIAQILYL QGQGGDAMDD AIALIEEAMA KLSAATGGTA
KPVQAVQPNV APPVAKPTRV VRAAELSSKT YLETEADVDA FVVKLRAELL AAIHSGQMAR
VQ
|
|---|
| |