| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4999 |
|---|
| Symbol | |
|---|
| ID | 4016155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | + |
|---|
| Start bp | 102359 |
|---|
| End bp | 102892 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637944637 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_551769 |
|---|
| Protein GI | 91790818 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.152694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGATATG CGGCAGTATG TCCAGTATTC CAAACCGCTA CACTTCAGAC TGTGCAAGAC
GACAGTGAAA CCCGAAAACT CGATGCCATC GTTGGGGCTG CCATCAAGGC ATTGGCCGAG
AGCGGTGCCG CGGATGAGTT TGTCGGTGCA TTTGCCGCGT CTCACCGTGC CAAGGTGGCC
AGCGTCCTTG GGGCCTCAGA ACCCGCGCAA GATTCACAAG ACTTGCTGAC CATCGTGACG
AAAGCAGTAG GCTTGGCCAT GGAGCAGGCC GGGATAGGCA AGCGCAAGGA ACCAATCACG
AAACGGGTCA ACGTCGAAAT TGCGGGACGC CGGACCTCAT TGACACTCAG CCGCGCAGTC
CTGGACAAGC TCTCCCAAGC CAAAGGAACC AAACAGCAAG CCAAGGCCGT GATTCAGGAT
CTGGCCAACA CGGCGCCTAT CGGCGTGGAA AACCGCTCCG GTTGGGTTGA GGAACGCCTG
CTTGGAGTTT TGACGCTCGC CGACCAGGAC GGCGCATCAG CTGCGCGGCA TTGA
|
|---|
| Protein sequence | MRYAAVCPVF QTATLQTVQD DSETRKLDAI VGAAIKALAE SGAADEFVGA FAASHRAKVA
SVLGASEPAQ DSQDLLTIVT KAVGLAMEQA GIGKRKEPIT KRVNVEIAGR RTSLTLSRAV
LDKLSQAKGT KQQAKAVIQD LANTAPIGVE NRSGWVEERL LGVLTLADQD GASAARH
|
|---|
| |