| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4977 |
|---|
| Symbol | |
|---|
| ID | 4016172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | - |
|---|
| Start bp | 78150 |
|---|
| End bp | 79235 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637944615 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_551747 |
|---|
| Protein GI | 91790796 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.669934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00180549 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTTC ATGAAAATCT AAATGATTCG CTCACAAAGG AGCGCGGTGG GCGGCATGGC
GGCAAAGGCC ATGAGTTTCA GCGCTACTGG GCACTTTGCC ATTTACTCAA GCTTGACCTC
GAACAAGATG ACTACCTCCT GCTCATTGAG TTCATCGAAG ATGTTGCGGT GCTCAATGCT
GCCAGCACAC CTACGGAACT CGACCTTTTC CAGATCAAGA AGAAGGAAGG TGCTACCGGC
GTCAAGTGGA CGAAGACAAC CTTGTCAAAG CCCCCCAAAG ACGGGATGTC CATTCTTGCG
AAGCTTTATG AATCTAAACG CATATCGCCC GATTCGAGCG CGTCAATTGC TTTCGTGAGC
AATGCGCCGG TTGACTTGAC TCTGCATGAC GGGAAGGCAT CCACCGATCA TGAACAGTTC
AGTGCCAGCG AAATAGAAAA GGACTTGAAA GAGTCACTGC AGAAGTCGAT TGCTGGCGAA
CTCAGTTGCA CTGAGCAGGA AATTGAATTT GGGTCACTGA CGTTCATCAA AAGCCCTCTG
GCTATGGATG ATTTGGAAAA TCACGCCATT GGGAAAGTAT CGTCATATTT GGGACAGAAG
TTCCCAACGC ACAGCGCTCG GGCTGATGTA TTTTGTAAGG CCCTCTACGG CGAACTGAAG
ATTCGGGCTA CCTCAACGCA GGACGCAGTC ACTTTTGAAG AACTCTGCAA GATCAGGGGT
ATCGCAAAGA GTCAGTTCAA TGAAATGTTG GCAACCACGC TGGCGCGAAA GCCGGATAGC
GAAATCATTG AATCCGCCAT CGCTGCGCTA GTTCAAGAAA ACGTTCCGTT CGTTGACCGC
AACAAAGTGA AAGATGAAGC CCGCCGCTAC CTGATTGACA AAGCTGGTAG GGGTGGAGCG
GTTGTGGCAG CGCTTGAGCA GTCTATTGAT CGACTCGTTC CAGTGATACC GAGCAACCTT
GTACGGTCTT GGGATGTCGC AAATTGGATC GAGGGCGAAA TAGCAACATC TGCGCAAGCC
TCAACTTTCA CCATGCTCGA TAAGCACTAC TTGCTTGCAG CGATCCTGTA CAGGGTCAAT
CAATGA
|
|---|
| Protein sequence | MPFHENLNDS LTKERGGRHG GKGHEFQRYW ALCHLLKLDL EQDDYLLLIE FIEDVAVLNA
ASTPTELDLF QIKKKEGATG VKWTKTTLSK PPKDGMSILA KLYESKRISP DSSASIAFVS
NAPVDLTLHD GKASTDHEQF SASEIEKDLK ESLQKSIAGE LSCTEQEIEF GSLTFIKSPL
AMDDLENHAI GKVSSYLGQK FPTHSARADV FCKALYGELK IRATSTQDAV TFEELCKIRG
IAKSQFNEML ATTLARKPDS EIIESAIAAL VQENVPFVDR NKVKDEARRY LIDKAGRGGA
VVAALEQSID RLVPVIPSNL VRSWDVANWI EGEIATSAQA STFTMLDKHY LLAAILYRVN
Q
|
|---|
| |