| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4929 |
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| Symbol | |
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| ID | 4015881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 25140 |
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| End bp | 31433 |
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| Gene Length | 6294 bp |
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| Protein Length | 2097 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637944569 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_551701 |
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| Protein GI | 91790750 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAA TCAACGGCAC CAGCGGAAAC GACGATCTGA TAGGTACTGC GAGTGACGAC
ACCATCAATG GCCTTGCTGG CAATGACACG TTAATCGGCG GGGCGGGCAA TGACAGTCTG
GATGGGGGGC TCGGCACCCA AGACTGGGCA AATTATTCGG ACGCAATAGC CCCTGTGACC
GTTAACCTGG CCACCGGCGC CGCCATAGGA GGCTCCGGAA ACGATACGTT GACCGGTCTG
GAAAATATTT TCGGATCGGC TTTTAATGAC AGCCTGACAG GCGATGCGAA CTCCAATGCC
CTGCGTGGCG AGGTAGGCGA CGACACTCTG GACGGGGACG CGGGGGACGA CTACCTCACC
GGCGGCGCCG GCAATGACAG CCTGACAGGC GGTATCGGCA ACGACACAGC CGACTACTTC
TACAGCAACG CAGTGGCAGG AATCAATGCG AGCCTGGCCA CTGGTGTCGT GACGGGTGGA
GATGGCAGCG ACACCCTTAC AGGCATTGAG AATATCAACG GCACAAACTT CAGCGATAAC
ATTGTGGGCG ATAGCAACGC CAACGTCCTT CAGGGCCAGG GCGGCGACGA CACGCTCAAC
GGTGGCGGCG GCAACGACAC CCTGCTCGGC GGTGCCGGCG CAGACGTCAT CACAGGCGGC
GCTGGCGACG ACAGCCTGGA CGGCGGCCTG CAGACCGATG CCATCAACTT CAGCGACTAC
AACACGCTGA ACTACAACGG CACCACCAGC GCGCTCACCA TCAACACCGC AGCCGGCACA
GCCTCCAGCA GCACCGACGG CAATGACACC TTTGTCAACT TCTACCGGAT TCGGGGCGGC
TCCGGCAACG ACACCATCAC CGGCGACTCC GCTTTGCACT TCGAGCAGTT TGAAGGCGGC
GCCGGCAATG ACTCGCTTGA CGGCGGCGCC ATCACCGACA CGCTCAACGG CACCAACGTC
AACCGCTTGA CCTACCAGAA CGCCACGGCC GGCGTCACTG TCGATTTGCT GGCCGGCACA
GCCGTCACCA CCAACAGCAC CCTGGCCGGA AACTCCGGCA CCGACACCCT GGCCAACTTC
AACCAGGTGC GCGGCTCCAG TTTCAACGAC ACCCTGCTGG GCAGCAACAC CACGGCGTTG
ACCGAGCAGT TTGAAGGCGG GCTGGGTGAC GACTACATCG ATGGCCTCGG CGGCTTTGAC
ATCGTGCGAT TTGTAAATTC TGCCTCTGGC GTCACCGCCA GCCTGGCGGA TGGCGCGGCC
ACCGGTGCGG GGACTGACAC CTTCGTCAAC GTCGAGGGGC TGTTTGGCTC CGATTTCAAC
GACTCCCTGA CGGGCGGCCT GGCCGCCAAC GGCGTCACCG TCTCCGACGG GCTCCTCGAA
GTCTTCCGCG GCGGCGCCGG CAACGACACC ATCGACGGTG GCCAGGGCTA CGACCGGGTT
CACTACGACA CCAGCACGTC CGGCGTCACC GTCACCCTCA ACGACACCGC CGACGGCAGC
GCCAGCGACG GCCTGGGCGG CACCGACGTG CTGCGCAGTA TTGAAGGCGT GCGCGGCTCC
GATTTCAATG ACATCATCAT CGGCAACTCG GGCAATAACA AGCTCGAAGG CCTGGGTGGA
AATGACTCCT TGCTAGGTGG TGCCGGCGCA GATACCTTGC TAGGTGGTGC CGGCAATGAT
TGGTTGGTCG GTGGGGGCGG GAATGATTTT ATCGATGGCG GGACCGGGAG TGACCTTGCG
TACTTTGAGG ATGCAGCTTC GGGGGTAGTG ATTGACCTTT CGACCGGAGT TGTTTCAAAC
AATGGTGAAG GGCAAGTCGA GACAATCATC AATGTTGAGA ACCTACACGG CTCCCACTTC
AACGATGTGA TCCAGCTGTC TTCTGTCGGT GGCTATGTAT TTGGGCGCGC AGGCAATGAC
AGCCTGACTG GTGGTGTTGG GAACGACAAC TTTATTGGAG GAAGTAGCAA CGACACCGTC
AACGGTGGTG GTGGCGTCGA TTTTGTGGAT TTCTTTGATG ATGGGTTTGA CAGCGCTGGT
TCCGGCATTC AAGGAGCTTT CGTAAACCTA GCAGTTGGGA CAGCCACAGA CAGCTGGGGT
GGCACCGATA CGTTGAGCAA CATCGAAAAT GTTGGTGGCT CCGCCTTTGG CGACACCATC
ACTGGTGACG ATGCCAACAA CTTCCTGGAC GGCCGGGCCG GCAACGACAC CCTGCTTGGC
GATGCCGGTG CAGACACCAT CACAGGCGGC GCGGGCGACG ACAGCCTGGA CGGCGGCCTG
CAGATCGATG CCCTCAACTA CAGCGACTAC AACACGCTGA GCTACAACGG CACCACCGGT
GCGCTCACCA TCAATACCGC AGCCGGCACG GCCTCCAGCA GCACCGACGG CAATGACACC
TTTGCCAATT TCTACCGAAT TCGGGGCGGC TCCGGCAACG ACACCATCAC CGGCGACTCC
GCTTTGCACT TCGAGCAGTT TGAAGGCGGC GCCGGCAATG ACTCGCTTGA CGGCGGCGCC
ATCACCGACA CGCTCAACGT CAACCGCTTG ACCTACCAGA ACGCCACGGC CGGTGTCACT
GTCGATTTGC TGGCCGGCAC GGCCGTCACC ACCAACAGCA CCTTGGCCGG AAACTCCGGC
ACCGACACCC TGGCCAACTT CAACCAGGTG CGCGGCTCCA ATTTCAACGA CACCTTGCTG
GGCAGCAACA CCACGGCATT GACCGAGCAG TTTGAAGGCG GGCTGGGTGA CGACAGCATC
GACGGCCGCG GCGGCTTTGA CCTCGTGCGC TTCAACTCCT CCAGCGTCGC TGGCGTCACC
GCCAGCCTGG CGACTGGCAC GGCCACCGGT GCGGGGAATG ACACCTTCGT CAACGTCGAA
GGTCTGATTG GCTCCGACTT CAACGACTCC CTGACGGGCG GCCTGGCCGC CAACGGCGTC
ACCGTCTCCG ACGGGCTCCT CGAAGTCTTC CGCGGCGGCG CCGGCAACGA CACCATCGAT
GGCGGCCAGG GCTACGACCG GGTTCACTAC GACAGCAGCA CGTCCGGCGT CACCGTCACC
CTCAACGACA CCGCCGACGG CAGCGCCAGC GACGGCCTGG GCGGCACCGA CGTGCTGCGC
AATATTGAGG GCGTGCGCGG CTCCGACTTC AGCGATAGCA TCACTGGCGA CGCAGGCAAT
AACAGGCTCG AAGGCCTGGG TGGAAATGAC ACGCTCAATG GCGGCGACGG CAACGACACG
CTCGACGGCG GCGCGGGCGA TGACACGTTG CTGGGTGGTG CTGGCGCAGA CACCCTGATT
GGAGGCGCAG GCAACGACCT CATTGATGGT GGCCTGGTGC TGGACCGCAT CAATGGCACC
GATTACAACT TTGTCGACTA CGTTTCTGCA ACGGCAGGCG TCAACATCAG TCTCTCCGGC
ATTACCGGCG ACGGCAGCAC TGGCAGCGGC GCAGCTACTG GTGACGCTTC GGTTGGAGTC
GACACCCTGA TGAACGTCAA CCAGATACGG GGCTCAAACT TCAATGACAC CATTACCGGC
AGCACCGCGC TGATCTTCGA GCAGTTTGAA GGCGGTGCCG GCAACGATAT CCTTGACGGC
GGTGCCATCA CCGATACGCT TAACGGTGAC AACGACAACC GCGTTACCTA CCACAATGCC
ACCGGCGCTG GCGTCGCGGT TGATTTCATC GCCGGCACAG CCGTTGGTGC AGCAGGCAGC
AATATCGGTA GCGATACCCT TGCCAATTTC AACCACGTAC GCGGCAGCAA CTTTGACGAC
ACCTTGCTCG GCTCCGATCG AACCGATCTT ACAGAGCAGT TTGAAGGCCG AGCCGGCAAC
GACACCATCG ACGGTCGGGG TGGTTTTGAC ATCGTTCGCT ACGGCAGTGC CACCGCTGGT
GTCACGGTCA ACCTGGTCAC GGGCACAGCC ACTGGTGCGG GCGTCGGCAC CGACACATTG
CTCAACATTG AAGGTGTGCG TGGCTCGGCG TTTGATGACG TTCTGACCGG TGGTAACGCT
GCCAATGGTG TAACGATCGG TGATGGACTG AGCGAAGTTT TCCGTGGCGA GGCTGGCAAC
GACACCATCG ATGGCGGCCA GGGTTACGAC CGAGTCGACT ACACCAGCAG CACGGCCGGT
GTTACCGTAA CCCTCAATGA CACCGCCGAC GGCTCTGCCA ATGACGGCCT GGGCGGCACG
GACATGCTGC GCAATATTGA GGGCGTACGC GGCTCCGCTT TCAACGACTC GCTGACAGGC
AGCGACACGG CGGCCTTTGA ATCTTTCGAG GGGCGCGAAG GCGACGACAC CATCAATGGC
ATGGGCGGCG TTGACCGGGC GGACTATCAA AACTCCAGGG CCGGGGTAAC GGTCAACCTG
GCCAACAACA CCGCCAGCGA TGATGGTTAC GGCGGAACAG ATACGCTACT CAACATCGAG
AACGTGCGCG GTTCACGCGA CTTTAATGAC TCAATCACTG GCAGCGCAGC AGATAACCGG
CTGGAAGGTC TCGGCGGCAA CGACACCCTC GATGGTGGCA ATGGCAACGA CACACTAATC
GGTGGCTTCG GCAACGATAG CCTGGTTGGC GGCGCTGGCA TTGATACGGC CACCTACGCA
GATGCCAGCG GCGCTGTGGT GGTAAGCATC AGCGGCACCG GGAGTGCAAG CGGCGGCTCA
GGTAACGACA CACTGTCAGG GATCGAGAAC CTCATCGGCA GCGCCTATAA CGACACGCTC
ACAGGCAACA CATCTGCCAA CCGTATTGAA GGCGGCGCTG GGAATGACAG CTTGAATGGC
GGCACTGGCG CCGACACCCT GCTAGGGGGT GCTGGTGATG ACCAGTACAC CATAGACAAC
CTGGGCGACG TGGTCATCGA AGACGCGTCG GCTGGAACGG ACACCATCGT GAGCAGCGTG
GATTACGTGC TGGGCGTTAA CCAGGAGAAT CTGCGTCTTA CGGCTGCAGT AGGCGGCAAC
GGCACGGGCA ACAACCTGGC CAATCTGATT TTGGCCTCAG CAGGAGACAA CATTCTGGAT
GGCAGTACGG GTAACGATAC CGTTTCCTAC GCTTACAGTG GTGCCGGTGT TACTGCCAGC
CTCACCAGCC GCACTGCGAC CGGTGGCTCC GGCAACGACA GCGTCACCAA CTTCGAGAAC
ATCATCGGCT CGAACTACGC CGACAGCCTG ATCGGCAACA CGCTGGCCAA CCGACTCGAA
GGCGCGGGAG GTGCCGACAG CCTCAATGGC GGCACAGGCG CTGACACCCT GATTGGTGGC
AGCGGCTCCG ACCAGTTCTA CGTCGAAAAT GTCGGCGACA TCGTCATCGA GACCGGCTCG
GATGCCCTGA GTGGCACCGA CATCGTTTTT GCCGCCATCA GTTACGCCCT CACTGCCAAC
GTCGAAAACC TGCGCATCAA CACCACTGGC AACGTCAACG CAACCGGCAA TGAACTGGAC
AATGTGCTGT TTGCCGGTGC CGGCAACAAC ACTCTCGACG GTGGCGATGG CATTGATACC
GCCAACTATG GGTTCACTAG TGGCGGAGTC AATGTCAGCC TGGCCATCGC ATCGGCCCAG
GCAACCGGCA ACTCCGGCAG CGACACGCTG CTCAATATCG AAAACCTGAC CGGCTCCAAC
TACAACGACA CCCTGCAAGG CAACTCTGCC GACAACGTGA TCGAAGGCGG GGTTGGCATT
GACACCCTGA CCTACGCGGC GGCATCCGCT GCTGTCAACG CGAGCCTGTC CACCAAGACC
GCCAGCGGAG GCGAAGGCAA TGACACCATT CTGCGCATAG AGAACCTGAT TGGCTCGGCT
TTCAACGATC TGCTGACCGG CAGCAGCGTG GCCAACATGC TTGATGGGGG CGAGGGCAAC
GATACCCTGA ACGGCTCTAG CGGAAACGAC ACACTGAGCG GAGGCGGCGG GAATGATCGA
CTGCTCGGCG GGGCGGGTCA GGACAGTGTG TCCGGCGGTA GCGGAGCAGA CACCTTTGAC
TTCAACGCCT TGGCCGAAAC GGGCATTACG TCACTGACCT GGGACAGCAT CAGCGACTTC
AGCGCTGCCG CAGGAGACAA GATTGACCTG TCCACGCTGG ATGCCAATAC GGCACTGGCA
GGCAATCAAG CCTTCAGCTT TATTGGCACT GCCAATTTTT CCGCTGCCGG GCAAGTGCGT
TATGATGCCG CCGCCGGCAT GGTCTACGGC AGCGTCGATG CAGACGCAGA TGCAGAATTC
GCCATTCAAC TCGTCGGAGC GCCTGCTATT GTTTCAGCTG ACCTGATCCT TTGA
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| Protein sequence | MATINGTSGN DDLIGTASDD TINGLAGNDT LIGGAGNDSL DGGLGTQDWA NYSDAIAPVT
VNLATGAAIG GSGNDTLTGL ENIFGSAFND SLTGDANSNA LRGEVGDDTL DGDAGDDYLT
GGAGNDSLTG GIGNDTADYF YSNAVAGINA SLATGVVTGG DGSDTLTGIE NINGTNFSDN
IVGDSNANVL QGQGGDDTLN GGGGNDTLLG GAGADVITGG AGDDSLDGGL QTDAINFSDY
NTLNYNGTTS ALTINTAAGT ASSSTDGNDT FVNFYRIRGG SGNDTITGDS ALHFEQFEGG
AGNDSLDGGA ITDTLNGTNV NRLTYQNATA GVTVDLLAGT AVTTNSTLAG NSGTDTLANF
NQVRGSSFND TLLGSNTTAL TEQFEGGLGD DYIDGLGGFD IVRFVNSASG VTASLADGAA
TGAGTDTFVN VEGLFGSDFN DSLTGGLAAN GVTVSDGLLE VFRGGAGNDT IDGGQGYDRV
HYDTSTSGVT VTLNDTADGS ASDGLGGTDV LRSIEGVRGS DFNDIIIGNS GNNKLEGLGG
NDSLLGGAGA DTLLGGAGND WLVGGGGNDF IDGGTGSDLA YFEDAASGVV IDLSTGVVSN
NGEGQVETII NVENLHGSHF NDVIQLSSVG GYVFGRAGND SLTGGVGNDN FIGGSSNDTV
NGGGGVDFVD FFDDGFDSAG SGIQGAFVNL AVGTATDSWG GTDTLSNIEN VGGSAFGDTI
TGDDANNFLD GRAGNDTLLG DAGADTITGG AGDDSLDGGL QIDALNYSDY NTLSYNGTTG
ALTINTAAGT ASSSTDGNDT FANFYRIRGG SGNDTITGDS ALHFEQFEGG AGNDSLDGGA
ITDTLNVNRL TYQNATAGVT VDLLAGTAVT TNSTLAGNSG TDTLANFNQV RGSNFNDTLL
GSNTTALTEQ FEGGLGDDSI DGRGGFDLVR FNSSSVAGVT ASLATGTATG AGNDTFVNVE
GLIGSDFNDS LTGGLAANGV TVSDGLLEVF RGGAGNDTID GGQGYDRVHY DSSTSGVTVT
LNDTADGSAS DGLGGTDVLR NIEGVRGSDF SDSITGDAGN NRLEGLGGND TLNGGDGNDT
LDGGAGDDTL LGGAGADTLI GGAGNDLIDG GLVLDRINGT DYNFVDYVSA TAGVNISLSG
ITGDGSTGSG AATGDASVGV DTLMNVNQIR GSNFNDTITG STALIFEQFE GGAGNDILDG
GAITDTLNGD NDNRVTYHNA TGAGVAVDFI AGTAVGAAGS NIGSDTLANF NHVRGSNFDD
TLLGSDRTDL TEQFEGRAGN DTIDGRGGFD IVRYGSATAG VTVNLVTGTA TGAGVGTDTL
LNIEGVRGSA FDDVLTGGNA ANGVTIGDGL SEVFRGEAGN DTIDGGQGYD RVDYTSSTAG
VTVTLNDTAD GSANDGLGGT DMLRNIEGVR GSAFNDSLTG SDTAAFESFE GREGDDTING
MGGVDRADYQ NSRAGVTVNL ANNTASDDGY GGTDTLLNIE NVRGSRDFND SITGSAADNR
LEGLGGNDTL DGGNGNDTLI GGFGNDSLVG GAGIDTATYA DASGAVVVSI SGTGSASGGS
GNDTLSGIEN LIGSAYNDTL TGNTSANRIE GGAGNDSLNG GTGADTLLGG AGDDQYTIDN
LGDVVIEDAS AGTDTIVSSV DYVLGVNQEN LRLTAAVGGN GTGNNLANLI LASAGDNILD
GSTGNDTVSY AYSGAGVTAS LTSRTATGGS GNDSVTNFEN IIGSNYADSL IGNTLANRLE
GAGGADSLNG GTGADTLIGG SGSDQFYVEN VGDIVIETGS DALSGTDIVF AAISYALTAN
VENLRINTTG NVNATGNELD NVLFAGAGNN TLDGGDGIDT ANYGFTSGGV NVSLAIASAQ
ATGNSGSDTL LNIENLTGSN YNDTLQGNSA DNVIEGGVGI DTLTYAAASA AVNASLSTKT
ASGGEGNDTI LRIENLIGSA FNDLLTGSSV ANMLDGGEGN DTLNGSSGND TLSGGGGNDR
LLGGAGQDSV SGGSGADTFD FNALAETGIT SLTWDSISDF SAAAGDKIDL STLDANTALA
GNQAFSFIGT ANFSAAGQVR YDAAAGMVYG SVDADADAEF AIQLVGAPAI VSADLIL
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