| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4904 |
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| Symbol | trmE |
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| ID | 4012414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 5195626 |
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| End bp | 5197062 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637944546 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_551678 |
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| Protein GI | 91790726 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.586964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCC GACACCACGA CCCCATTGTT GCCATCGCCA CCGCACCCGG CCGCGGCGCG
GTGGGCATTG TGCGCGTCTC GGGCAAGGAC ATCGCCCCCG TGATCGCGGC CATTTGCGGC
CGCGCCCTGG CGCCACGCCA GGCCACCTAC CTGCCGTTTC GCGACGCGCA AGGCCAGGTG
ATCGACCAGG GCCTGGCGAT TCACTTCCCG GCCCCCCACT CCTACACCGG CGAGGATGTG
CTGGAGTTGC AGGCGCATGG CGGGCCGGTG GTGCTCCAGC TGCTGCTGGC GCGCTGCCTG
GAAGCCGGTG CCGCGCTCAA CCCCGCCATC GGGCAACCGT GGCTGGCGCA GCTGCGGGTG
GCGCAGCCCG GGGAATTCAC AGAGCGCGCG TTTCTTAATG ACAAGATCGA CCTGGCGCAG
GCCGAGGCCA TTGCCGACCT GATTGATGCC AGCACCGAAA CGGCGGCCCG TTCGGCGGCG
CGGTCCATGT CGGGCGAGTT CTCGCTGGCG GTGAACACCT TGCTGGAGCA GCTGATTCAC
CTGCGCATGC TGGTGGAGGC CACGCTGGAC TTTCCGGAGG AAGACATCGA CTTTCTGCAA
AAGGCCGATG CCCAGGGCCA GCTGTCGCGG CTGCAGGCCA CGCTGACAGG CGTGATGCAG
CGCGCCACGC AGGGCGCGAT CCTGCGCGAG GGCATCAAGG TGGTGATTGC GGGCCAGCCC
AACGCCGGCA AGAGTTCGCT GCTCAATGCG TTGGCCGGTG CCGAACTGGC CATCGTGACA
CCGATTGCCG GGACCACGCG CGACAAGGTG TCCGAGTTGA TCCAGATCGA AGGCGTCCCC
CTGCACGTGG TCGACACTGC CGGCCTGCGC GAGGCACTGG ACGAGGTGGA GAAAATAGGC
GTGGAACGCG CCTGGGCGGA AATTGAAAGC GCCGACGCGG TCCTGTTTCT GCATGACCTG
AGCCGTCGGG ACGCCGCCCT GCCGGCGCAG GACACCATCA ACTACATAGC AGCCGATGAC
CGTATCGCAC GGACATTGGC CAACAAGCTG CCTGAAAACA CGGCCATCAT CGATGTTTGG
AACAAATCCG ACCTGACCAG CCCGGCCGGG CTGCAGCAGG TGCAGGGGGG CGTACTGATT
TCCGCCAAAA CCGGCGCCGG CCTGCAGACC CTGCGCCAGC GCCTGCTGCA GGTGGTGGGC
TGGCAGGCAG CACCGGAAGG CGTGTTCATG GCGCGTGAAC GCCATGTGCG CGCGCTGCAT
CATGTGCAGG ACCAATTGGC CACCGCCGGG CGCCAGCTGC AGGCTGCACG GCCGGCGTTG
GACCTGCTGG CGGAGGATTT GCGGCAGGCG CAGCGGCAAC TCAGCGAGAT CACGGGTGAG
TTCACGCCTG ACGATCTGCT GGGCGAGATT TTTTCCAGAT TCTGTATCGG AAAGTAG
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| Protein sequence | MLARHHDPIV AIATAPGRGA VGIVRVSGKD IAPVIAAICG RALAPRQATY LPFRDAQGQV
IDQGLAIHFP APHSYTGEDV LELQAHGGPV VLQLLLARCL EAGAALNPAI GQPWLAQLRV
AQPGEFTERA FLNDKIDLAQ AEAIADLIDA STETAARSAA RSMSGEFSLA VNTLLEQLIH
LRMLVEATLD FPEEDIDFLQ KADAQGQLSR LQATLTGVMQ RATQGAILRE GIKVVIAGQP
NAGKSSLLNA LAGAELAIVT PIAGTTRDKV SELIQIEGVP LHVVDTAGLR EALDEVEKIG
VERAWAEIES ADAVLFLHDL SRRDAALPAQ DTINYIAADD RIARTLANKL PENTAIIDVW
NKSDLTSPAG LQQVQGGVLI SAKTGAGLQT LRQRLLQVVG WQAAPEGVFM ARERHVRALH
HVQDQLATAG RQLQAARPAL DLLAEDLRQA QRQLSEITGE FTPDDLLGEI FSRFCIGK
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