Gene Bpro_4883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4883 
Symbol 
ID4012456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp5172173 
End bp5173069 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content65% 
IMG OID637944525 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_551657 
Protein GI91790705 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CCAACGTGGG CGTCATCGGC CTGGGCGCCA TGGGCAGGGG CATTGCCCAG 
ACCTTGAGAA GCGCCGGCTA CGCGGTGCAT GTGTACGACG TCCGCGCGCA GGCCGTCCAG
GAATTTGTCG CCGCTGGCGG CGTCGCATGC GACACCCTGA CGCAGCTGGC CGCCGCCTGC
GAGGTCGTGG TGTCCGTGGT GGTCAATGCC GCTCAGACGG AAGATGTGCT GTGGAGTGAA
CAGGGCGTTG CCTCTGCGAT GAAATCCGGC AGTGTCTTCG TGATGTGCTC AACCGTTGAT
CCGCAATGGT CGATCGCCAC CGAGGCCCGC CTGGACAAGC TGGGCATTCA CTATGTGGAC
GCACCCATCT CGGGCGGAGC GGCCAAGGCC GCGGCTGGCC AGATGACCGT CATGAGTTCT
GCGCGGCCCG CGGCCTATGA AAAAGCCGGA GACGTGCTCG CGGCGATGGC GGGCAAGGTA
TACCGCCTGG GCGACTGTGC CGGCGCGGGC AGCAAGGTCA AGATCATCAA CCAGCTGCTG
GCCGGCGTGC ACATCGCTGC TGCCGCCGAG GCCATGGCCC TGGGGCTGCG CGAAGGTGTG
GATCCAAACG CGCTGTACGA GGTCATCACC CACAGCGCCG GCAACAGCTG GATGTTCGAG
AACCGCATGG CCCATGTGCT GGCTGGCGAC TACACGCCGC TGTCGGCGGT CGACATCTTC
GTCAAGGACC TGGGGCTGGT GCTCGACACC GCGCGCGCCA GCAAATTCCC GCTGCCCCTG
TCGTCGACCG CGCACCAGAT GTTCATGCAG GCCTCGACTG CTGGCTTCGC CAGGGAAGAC
GACAGCGCCG TGATCAAGAT TTTCCCGGGC ATCCAGCTGC CCAAAAGCAC CAGCTGA
 
Protein sequence
MSKTNVGVIG LGAMGRGIAQ TLRSAGYAVH VYDVRAQAVQ EFVAAGGVAC DTLTQLAAAC 
EVVVSVVVNA AQTEDVLWSE QGVASAMKSG SVFVMCSTVD PQWSIATEAR LDKLGIHYVD
APISGGAAKA AAGQMTVMSS ARPAAYEKAG DVLAAMAGKV YRLGDCAGAG SKVKIINQLL
AGVHIAAAAE AMALGLREGV DPNALYEVIT HSAGNSWMFE NRMAHVLAGD YTPLSAVDIF
VKDLGLVLDT ARASKFPLPL SSTAHQMFMQ ASTAGFARED DSAVIKIFPG IQLPKSTS