| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4880 |
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| Symbol | |
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| ID | 4012453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 5169154 |
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| End bp | 5170446 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637944522 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_551654 |
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| Protein GI | 91790702 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA GTGCCATCCT TCTCGCTTCC GTTTGCATCT ACCTCGCCAT CGGTGTGCCC
GTGGCTTTTG CGCTGGGGCT GTCCACCGTG ACCGCGCTGG TGCTGTCGGA CCAGTTTCCG
ATGATCGTGA TGCTCAAGGA GACTTTCACC GGCATTGACA GCTTCCCGCT GATGGCGGTG
CCCTTTTTCA TCCTCGCGGC AGAACTGATG AGCGGCGGCT CGCTGACCGA GGTGCTGCTG
CGCTTTGCCG GGCAATTCGT CGGCCACAAG CGCGGGGGCC TGGGCTATAC CAACGTGGTG
TCGCTGACTT TCTTCTCGGG CATCTCCGGT TCGGCGCTGG CTGATGCCGC CGGGCCCGGG
TCCATGATGA TCCGCATGAT GGACAAGGCC GGCTACGACC GCGCCTACGC CGCGGCGCTG
ACGGCCTCAA CCGCGATCGT GGGGCCTATC ATCCCGCCCT CTATCATCAT GATCATTTAC
GCGCTGGCCG ACGACAACGT GTCGGTGGGT GCCCTGTTCA TTGCGGGCCT GGTGCCCGGC
ATCCTGATTG CGGCGGCGAT GTGCGTCGTG AACTGGCATG TGTCCAAACG GCGCAACTAC
CGCGGTGACA ACGAACATCC CACGATGGCG GAAATCCTGC GCACGACCTG GAAGGCGCTG
CCGGCCATCC TGCTGCCGGT GCTGATCCTG GGCGGCATGC GCGCCGGCTG GTTCACGCCG
ACCGAAGCGT CCGTCGTAGC CGTTTTCTAC GCGCTGGTCT GCGGCAAATA CGTGTACGGC
ACGCTGGAAT GGAAGGCGGT ACCGGACATT CTGTCGCGCT CGGCGCTGCT GACCGCCTCG
GTGCTGGTCA TCATCGCCAT GTCGGCATCG TTTGCATGGG TGCTGACGAT CGAAGGCGTG
CCGCAACTGG CCGCAAACTG GATCGCTGAC ATGCAGCTGA GCTCCTGGAT GTTCCTGCTG
GTGGTGAACG TCTTCCTGCT GCTGTTCGGC ATCTTCATCG AGCCGCTGCC CGGCGTGATG
GTGCTGGTGC CGATTCTCGC GCCGGTCGCG GCCAAGGTCG GCATCGACCC GATCCACTTC
GCCATGATCG TCATCTACAA CCTGACGCTG GGCATGATCA CGCCGCCCGT GGGCGGGCTG
CTGTTTGTCA CCTCGAACGT GTCGCGCGTT CCGCTGAGCG CCCTCACGCG TGAACTGAAA
CCCTTCCTGT GGGCGCACGG CGTGGTGCTG GTTCTTTTGA CCTTTGTGCC GGCGCTGAGC
AACTGGCTGC CGCATGCCAT GGGGTTTAAA TAG
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| Protein sequence | MTASAILLAS VCIYLAIGVP VAFALGLSTV TALVLSDQFP MIVMLKETFT GIDSFPLMAV
PFFILAAELM SGGSLTEVLL RFAGQFVGHK RGGLGYTNVV SLTFFSGISG SALADAAGPG
SMMIRMMDKA GYDRAYAAAL TASTAIVGPI IPPSIIMIIY ALADDNVSVG ALFIAGLVPG
ILIAAAMCVV NWHVSKRRNY RGDNEHPTMA EILRTTWKAL PAILLPVLIL GGMRAGWFTP
TEASVVAVFY ALVCGKYVYG TLEWKAVPDI LSRSALLTAS VLVIIAMSAS FAWVLTIEGV
PQLAANWIAD MQLSSWMFLL VVNVFLLLFG IFIEPLPGVM VLVPILAPVA AKVGIDPIHF
AMIVIYNLTL GMITPPVGGL LFVTSNVSRV PLSALTRELK PFLWAHGVVL VLLTFVPALS
NWLPHAMGFK
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