| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4878 |
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| Symbol | |
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| ID | 4012451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 5166774 |
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| End bp | 5168057 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637944520 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_551652 |
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| Protein GI | 91790700 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.289399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.88306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAGA TTCTTCTGGG CTGTATTGCC GACGACTTCA CCGGGGCCAG CGACCTGGCC
AACAACCTGG TGCGCGCCGG CATGCGCGTG GTGCAGACCA TAGGCGTGCC GGCCGGCCCG
CTCGGCGCCG AAGTGGATGC CGTGGTGGTG GCGCTGAAGT CGCGCACCAT TGCGCCGGCC
GAGGCCGTGG CGCAATCGCT GCAAGCGCTG GCCTGGCTGC AGGCCCAGGG CGCGCAGCAA
ATCTATTTCA AGTACTGCTC CACCTTCGAC AGCACCTTCA GCGGAGAAAC CCGCGGCAAC
ATCGGCCCGG TGACCGAAGC CCTGATGGAT GCGCTGAAGA CTGACTTCAC CATCGCCACA
CCCGCTTTTC CCGACAACCA GCGCACCGTC TTCAAGGGCT ACCTGTTTGC CGGCGACGTG
CTGCTCAATG AAAGCGGCAT GCAGAACCAC CCGCTCACCC CTATGACCGA CGCCAACCTG
GTGCGCGTGC TGCAGGCGCA GACGCGGCGC AAGGTCGGGC TGATTGACTA CCGTGTCGTG
GCCCGGGGCG AGGCAGCGAT CCGTGCGCGC ATTGACCAGC TCAAGGCCGA GGGGATCGGG
GTCGCCGTGG TGGACGCGCT GTCCAACGAC GACCTGTTGC GCCTTGGCCC GGCGCTCAAG
GGCATGCCGC TGGTGACCGC CGGCTCCGGC GTGGCCATCG GCCTGCCGCA GAACTTCGGC
ATCACGCCCT CCTCCAAAGC CAGCGAGCTG CCCCCGGCAG GCGGCCTGCA GGCCGTGGTG
TCGGGCAGCT GCTCGCTGGC CACCAACCGC CAGGTGCTGG CCTTCATCAA GTCCGGCCGG
CCGGCGCTGG CCATCGAACC CCTGCGCATC GCGGCCGGCG TGGACGTTGC GGCCGAGGCA
CTGACCTGGG CTGCGCCGCT GATCCAGCAA GGCCCGGTGC TGGTGTATTC CACGGCGGAC
TCGAATGCGG TGAAATCGGT GCAAGGCCGC CTCGGCGTCG AAGAAGCCGG CGCCATGGTT
GAGCGCACCA TTGCGGCCAT TGCGCGCGGC CTGGTCGAGC GCGGCGTGCG CCAGCTGGTG
GTGGCCGGCG GGGAAACCTC GGGCGCCTGC GTGCAGGCCC TGAACATCTC CCAGCTGCAG
ATCGGCCCGC AGATCGATCC GGGCGTGCCC TGGTGCCATG CGTTGTCGGA CGCCGCTGCC
GGTCAAGGGG TGCACCTGAC GCTGAAGTCG GGCAACTTCG GCAGTGATGA CTTCTTCACC
AAAGCCTTTA CGATGCTGCA ATGA
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| Protein sequence | MGKILLGCIA DDFTGASDLA NNLVRAGMRV VQTIGVPAGP LGAEVDAVVV ALKSRTIAPA
EAVAQSLQAL AWLQAQGAQQ IYFKYCSTFD STFSGETRGN IGPVTEALMD ALKTDFTIAT
PAFPDNQRTV FKGYLFAGDV LLNESGMQNH PLTPMTDANL VRVLQAQTRR KVGLIDYRVV
ARGEAAIRAR IDQLKAEGIG VAVVDALSND DLLRLGPALK GMPLVTAGSG VAIGLPQNFG
ITPSSKASEL PPAGGLQAVV SGSCSLATNR QVLAFIKSGR PALAIEPLRI AAGVDVAAEA
LTWAAPLIQQ GPVLVYSTAD SNAVKSVQGR LGVEEAGAMV ERTIAAIARG LVERGVRQLV
VAGGETSGAC VQALNISQLQ IGPQIDPGVP WCHALSDAAA GQGVHLTLKS GNFGSDDFFT
KAFTMLQ
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