Gene Bpro_4877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4877 
Symbol 
ID4012450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp5166027 
End bp5166701 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID637944519 
Productputative aldolase 
Protein accessionYP_551651 
Protein GI91790699 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.577469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.810291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA ACCAGGCCCG TGAAGAAATC TGCCGCGTGG GCAAAAGCCT GTTCGAGCGC 
GGCTATGTGC ACGCCACTGC CGGCAATATC AGCGTACGGC TCGATGCTTC GGCGGGCGGC
GGCTTCCTGA TCACGCCGAC GGACGCCTGC CTGGGCTTTC TCGATCCGGC CAGGCTGGCG
CGGCTGGACG CCAACGCGCA ACAGCTCAGC GGCGACCGGG CCAGCAAGAC CATTGCACTG
CATGCCCATA TCTATGGCGC TGCGGGCCGG TTTGATGCCA ACACCTGCTG CGTCATCCAT
ACCCACAGCA CGCACTGCGT GGCGCTGAGC CTGCAGGCCA AGGGGACGGA GCTGCTGCCG
CCGATCACGC CCTATTTCGT GATGAAGGTC GGCCATGTGC CGCTGATCCC CTATCACCGC
CCCGGTGACC CCGATGCAGC GGCCCTGGTG GCGCAAACCA TCACGCGCTA TGGTGAGCGC
GGCACGCCGA TCCGTGCTGT CATGCTGGAG CGCCTGGGGC CCAATGTCTG GCACGACTCG
CCCGCCGCAG CCATGGCCGT GCTGGAAGAA CTGGAAGAAA CCGCCAGGCT GATGGCCCTG
AGCCAGCCCT TACCCCAACC CCTGACCGAC ATCCAGATCG ATCAATTGCG CCAGACCTTT
GGCGCGCACT GGTGA
 
Protein sequence
MTENQAREEI CRVGKSLFER GYVHATAGNI SVRLDASAGG GFLITPTDAC LGFLDPARLA 
RLDANAQQLS GDRASKTIAL HAHIYGAAGR FDANTCCVIH THSTHCVALS LQAKGTELLP
PITPYFVMKV GHVPLIPYHR PGDPDAAALV AQTITRYGER GTPIRAVMLE RLGPNVWHDS
PAAAMAVLEE LEETARLMAL SQPLPQPLTD IQIDQLRQTF GAHW