Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4858 |
Symbol | |
ID | 4012470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 5143396 |
End bp | 5145714 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637944500 |
Product | malic enzyme |
Protein accession | YP_551632 |
Protein GI | 91790680 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.633507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0500953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACAC CCACCGCCGC GACGCCCGAC AACCGTGACG AAAAACGCGC AGAACTGCGC CGCGCCGCGC TCGAATACCA CGAGTTTCCC ACCCCCGGCA AACTGGCCAT CGCAGCCACC AAGCAACTCA CCAACCAGCG CGACCTGGCG CTGGCCTACT CGCCCGGCGT GGCGGCGCCC TGCGAGGAAA TTGTCAAGGA CCCGAACGCG GCCTTCAAAT ACACCAGCCG CGGCAACCTG GTGGCAGTGG TGACCAACGG CACGGCAGTG CTGGGCCTGG GCGACATCGG CCCGCTGGCG TCCAAGCCGG TGATGGAAGG CAAGGCGGTT TTGTTCAAGA AGTTTGCCGG TGTTGATGTG TTCGACATCG AAATCGACGA AAAGGACCCG GCCAAACTGG TCGACATCAT CGCCGCGCTG GAACCGACCT TTGGCGCCAT CAACCTGGAA GACATCAAGG CGCCCGACTG TTTTTACGTG GAGCGTGAAC TGCGCAAGCG GATGAAGATA CCGGTGTTCC ACGACGACCA GCATGGCACG GCCATCACGG TGGGCGCGGC GGTGCTGAAT GCGCTGAAAG TCGTGGGCAA GGACCTGAAA CAGGTCAAGC TGGTGACCTC AGGCGCGGGC GCGGCGGCGC TGGCCTGCCT CGGGCTGCTG ATCAAACTCG GCATTCCGCG CGAAAACATC TATGTGACCG ACCTGGCCGG CGTGGTCTAT GAAGGCCGCA CCGAACTGAT GGATGAAGAC AAGATCCAGT TCGCGCAAAA AACGTCGGCC CGCACCCTGG GTGAAATCAT CGAAGGCGCG GACATCTTTT TGGGTCTTTC GGCAGGTGGT GTGCTCAAGA AGGAGATGGT CAAGAAGATG GCGGCCAAGC CCATCATTCT GGCCCTGGCC AACCCCAATC CGGAGATATC GCCAGAAGAC GTCAAATCGG TGCGTGATGA CGCCATTATG GCAACAGGTC GGACTGATTA CCCGAACCAG GTCAACAACG TCCTGTGCTT CCCCTATATT TTCCGGGGTG CCCTGGACGC CGGCGCGTCA ACCATCACCA TCGAGATGGA AATTGCCGCA GTGCACGCGA TTGCCGAGCT GGCCCAGGCC GAGCAGAGTG AGGTGGTGGC GGCCGCCTAC GTCGGCGAGA AGCTCACCTT CGGACCGGAC TACCTGATTC CCAAGCCCTT CGATCCTCGC CTCATGATGA AGATTGCGCC GGCCGTGGCC AAGGCGGCTG CCGACAGCGG CGTAGCCCTG CGGCCGATCC AGGACATGAC CGCCTACCGC GAGAAGCTGC AAAGTTTTGT CTATGCCTCC GGCACCGTGA TGAAACCGAT CTTTGCCTCG GCCAAGACGG CGGCCCGCAA GCGCGTGGCC TATGCCGAGG GCGAGGAAGA GCGCGTGCTG CGCGCCTGCC AGATCGTGGT GGACGAGAAC CTGGCGCGCC CGACCCTGAT CGGCCGGCCC GCGATCATTG CCCAGCGCAT TGAAAAGTTT GGCCTGCGCC TGAAGCAGGA CCTCGACTAC GACGTGGTCA ATGTCGAGCA GGACCACCGC TACCGCGACT TCTGGCAGAC CTACCACCGC ATGATGGAGC GCCGCGGCGT GACCGTGCAG ATGGCCAAGA TCGAAATGCG CCGCCGCCTC ACGCTGATTG CCGGCATGCT GCTGCACAAG GGCGATGTGG ACGGGCTGAT CTGCGGCACC TGGGGCACCA CCGCCCACCA CCTGGACTAC CTGGACCAGG TGATTGGCAA GCGCGAGGGA GTATGCACCT ACGCCTGCAT GAATGGTCTG CTGCTGCCCG GACGTCAGGT GTTTCTGCTC GATACCCATG TGAACTACGA CCCGACGGCG GAGCAGCTGG CTGAAATCAC CACCATGGCG GCCGAGGAAA TGGTGCGCTT TGGCATCAAA CCCAAGGCGG CCTTGCTGTC GCACTCCAAC TTTGGCTCGT CCAGCCAGCC CAGCGCCCTG AAAATGCGCC GCACGCTGGA ACTGTTGCGC GACAAAGCAC CCTGGCTGGA AGTCGACGGC GAAATGCACG GCGACATGGC GCTGGATGCC GATACCCGCG GCGTCATCAT GCCCAACAGC ACGCTGACGG GTGAAGCCAA TTTGCTGGTG CTGCCCAACA TCGATGCGGC CAATATTGCC TACAACCTGC TCAAGACTGC CGCCGGTGGC AACATTACCA TCGGCCCCGT GCTGCTGGGG GCCAACAAGC CCATGCACAT CCTGACTCCG ACCGCCACCG TGCGCCGTAT CGTCAACATG ACAGCCCTCA CCGTGGCGGA TGCGAACGCG GCGAGATAA
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Protein sequence | MPTPTAATPD NRDEKRAELR RAALEYHEFP TPGKLAIAAT KQLTNQRDLA LAYSPGVAAP CEEIVKDPNA AFKYTSRGNL VAVVTNGTAV LGLGDIGPLA SKPVMEGKAV LFKKFAGVDV FDIEIDEKDP AKLVDIIAAL EPTFGAINLE DIKAPDCFYV ERELRKRMKI PVFHDDQHGT AITVGAAVLN ALKVVGKDLK QVKLVTSGAG AAALACLGLL IKLGIPRENI YVTDLAGVVY EGRTELMDED KIQFAQKTSA RTLGEIIEGA DIFLGLSAGG VLKKEMVKKM AAKPIILALA NPNPEISPED VKSVRDDAIM ATGRTDYPNQ VNNVLCFPYI FRGALDAGAS TITIEMEIAA VHAIAELAQA EQSEVVAAAY VGEKLTFGPD YLIPKPFDPR LMMKIAPAVA KAAADSGVAL RPIQDMTAYR EKLQSFVYAS GTVMKPIFAS AKTAARKRVA YAEGEEERVL RACQIVVDEN LARPTLIGRP AIIAQRIEKF GLRLKQDLDY DVVNVEQDHR YRDFWQTYHR MMERRGVTVQ MAKIEMRRRL TLIAGMLLHK GDVDGLICGT WGTTAHHLDY LDQVIGKREG VCTYACMNGL LLPGRQVFLL DTHVNYDPTA EQLAEITTMA AEEMVRFGIK PKAALLSHSN FGSSSQPSAL KMRRTLELLR DKAPWLEVDG EMHGDMALDA DTRGVIMPNS TLTGEANLLV LPNIDAANIA YNLLKTAAGG NITIGPVLLG ANKPMHILTP TATVRRIVNM TALTVADANA AR
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