Gene Bpro_4857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4857 
Symbol 
ID4012469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp5142003 
End bp5143211 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content68% 
IMG OID637944499 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_551631 
Protein GI91790679 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.485222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0812896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGC CCGTGCTGGT CATTGGCGCC GGGCTGGCCG GCTGGACCAC GGTGCGCGAG 
TTCCGCAAAC TGGACAACGG CACGCCCGTG GTGATGATCA CCGCGGACAG CGGCGACTTC
TACGCCAAGC CGTCCCTGTC GAATGCCTTC GCGCAGGGCC GGCTGCCGGC GCAGCTCATC
AGCACGCCCG CCGCCAAAAT GGCCGAATCG CTGAATGTGA CGCTGATGCC CCACACGCGG
GTGGAAGCGC TTGATGTGGC GGCCAAAACC GTCAGCACGT CTGCCGGGAC AATGGCCTAC
CGCGATCTGG TGCTGGCCAC GGGCGCGCAG CCGATTCGCG TGCCGCTCGA AGGCCAGGCC
GCGGACCGCG TGATCAGCGT CAATTCGCTC GAAGACTTCG CGCGTTTTCA CGCGAAACTG
CAGCCGGCGG GCGACGCCGC AGGCAACCGC GGCCGGCATG TGCTGGTCAT GGGTGCCGGG
CTGATTGGCT GCGAGTTTGC CAATGACCTG GCCCAGGCCG GCTACCGCGT CAGCGTGGTC
GATCCCGGTA CCCGCCCGCT GGCCGCCCTG CTGCCGGAAG CGGCCAGCGC GACCCTGCAG
CAGGCGCTGG AGGGACTGGG CGTGCACTTT TATTTCGGCG CCACGGTGCG CGCGGTCGAT
CCTGTTGATC CGGCCACAAC ACAACCGGCA GGCGCGGATT CACTGGAAAT TTCGCTGGCC
AATGGGGAAG TCATTGACGC CAGCTGCGTA TTGAGCGCCA TTGGCCTGAG AGCCGACACG
GCCCTGGCCC GGGCGGCAGG CCTGGCGGTC GACCGTGCCA TTGTGGTCAA TACCCGCCTG
CAGACCAGCG CCGAGGGGGT GTATGCGCTC GGCGACAGCG CCCAGTACGC CAGCGCGGTG
TCAAAACTGT CGGTGCATGG CAGCGCGCTG CCTTATGTCA TGCCCATCAT GGCGGCGGCC
AAGGCGCTGG CCGCCAATCT GGCGGGCACA CCGGCAGAAC TGGTTTTCCC GCTGATGCCG
GTTTCCGTGA AAACACCCTC GCTGCCGTTG GTGGTGGCCG CGCCGCAGCC CGGCACGGAC
GGCCAGTGGC ACATGCCGGA AGCCGGTTTG TGGCAATGGA TGGATGAGGC CGGCCTGCAG
CGCGGTTTTG TGCTGGCGGG CGCGCAGACC GCCCAGCGCA TGGTGCAGGC CAGGCGGGTC
GCGCTGTAG
 
Protein sequence
MTRPVLVIGA GLAGWTTVRE FRKLDNGTPV VMITADSGDF YAKPSLSNAF AQGRLPAQLI 
STPAAKMAES LNVTLMPHTR VEALDVAAKT VSTSAGTMAY RDLVLATGAQ PIRVPLEGQA
ADRVISVNSL EDFARFHAKL QPAGDAAGNR GRHVLVMGAG LIGCEFANDL AQAGYRVSVV
DPGTRPLAAL LPEAASATLQ QALEGLGVHF YFGATVRAVD PVDPATTQPA GADSLEISLA
NGEVIDASCV LSAIGLRADT ALARAAGLAV DRAIVVNTRL QTSAEGVYAL GDSAQYASAV
SKLSVHGSAL PYVMPIMAAA KALAANLAGT PAELVFPLMP VSVKTPSLPL VVAAPQPGTD
GQWHMPEAGL WQWMDEAGLQ RGFVLAGAQT AQRMVQARRV AL