| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4854 |
|---|
| Symbol | |
|---|
| ID | 4012466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 5140813 |
|---|
| End bp | 5141310 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637944496 |
|---|
| Product | rubrerythrin |
|---|
| Protein accession | YP_551628 |
|---|
| Protein GI | 91790676 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1592] Rubrerythrin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.836415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0724585 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAA CGCGACGCCC CGAAATCAAG ACCATGGCCA ATCTGGAGGC CGCCTTTGCC
GGCGAATCCA TGGCGCACAT CAAATACCGC TATTTCGCCA AGCTGGCCCG CGAAGCCGGT
GACGAAGCCA CGGCGCGCAC CTTTGAAGAA ACCGCCGACC AGGAAGTCAT GCACGCCTTC
GGCCATCTGG ACCTGCTCTA CCCCAAGGCG ACCATGACGC CCGCCAGGGC GCTGCAAATC
GCCATCGATG GTGAAACCTA CGAATACACC GAGATGTACC CGGGCTTCCG CGCAACCGCT
GAAGCCGAAG GCAACGCGGC GGCCGTGGCT GAAATGGACG AGCAGATCGA GGAGTCCAAA
GTGCATGCCG CACAATTCAA GGCCACCCTG GAAAAAGCCC AGAAACGCTT TGCGGCCCTG
GCCCGGGTGG AAGAGCGCCA CGCCAACCAC TACCAGGCGC GGCTGAACGT TGTCAACGAA
GGCGCCGCTG CGGCCTGA
|
|---|
| Protein sequence | MSTTRRPEIK TMANLEAAFA GESMAHIKYR YFAKLAREAG DEATARTFEE TADQEVMHAF
GHLDLLYPKA TMTPARALQI AIDGETYEYT EMYPGFRATA EAEGNAAAVA EMDEQIEESK
VHAAQFKATL EKAQKRFAAL ARVEERHANH YQARLNVVNE GAAAA
|
|---|
| |