Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4832 |
Symbol | |
ID | 4012483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 5119761 |
End bp | 5120636 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637944475 |
Product | phage integrase |
Protein accession | YP_551607 |
Protein GI | 91790655 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCCT TGCGCCAACG CATGCTCGAC GCCATGACCG TACGCGGCCT GGCCGAGCGC ACCCAGGAAT GCTACGCCGA AGCCGTCTCG CGCATGGCGC GCCACTACCA CCGCAGCCCC GATCTGCTCA GCCCCCAGGA GGTCGAGGCC TACTTGCTGC ACCTGGTCAA GGACCGCAAG CTTTCCTACA GCAGCGTCAA CCACGCCGCC AGCGCCAGTC GCTTCCTGTT TGAAACCGTC CTGGGGCGCA AGAGCGATGA GCACCTGCGC CCACCCATGG CCAAGGTGCC GCAAAAACAA CCTCACCTGC TCGCCCGCGA AGAAATCGCC CGCCTGTTTG CCTGCTGCGC CCACCCGGCC TACCGCATGG CGCTGCAAAC CCTCTACGCC ACGGGCCTGC GCGTCTCGGA AGTCGGCCGC CTGCGTGTGA GCGACATCGA TAGCGCGGCC GACCGCATGT GCGTGCGCGT GAACGCCGGC AAAGGCGGCG CCGACCGCTA CAGCATCCTG AGCCCAAGCC TGCTGGCGCT GCTGCGCTTG TACTGTCAAA CCTACGCGCC GCAACGCAAC CCAGGCAAAT GGCTGTTCGC CAACGGCACG GGCGAACGCG GCGTCGGCAT CGAGAGCCTG CAACGCGCCT ACCAGGCAGC CAGGCACTGC GCCGGCATCA CCAAGAGCGG TGGCACCCAC ACCCTGCGCC ACTGTTTCGC CACCCACCTG CTCGAAAGCG GCGTGGACCT GTACACCATC AGCCGCCTGC TGGGCCACCG CCACATCAGC ACCACCAGCC GTTACCTGCA CCTGATCAGC CCGCAGTTCC GGCCACCCAA GAGCATCGAC CCGCTGGATC TGCTGGCCGG CCTGCCGCGC CTGTAG
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Protein sequence | MTPLRQRMLD AMTVRGLAER TQECYAEAVS RMARHYHRSP DLLSPQEVEA YLLHLVKDRK LSYSSVNHAA SASRFLFETV LGRKSDEHLR PPMAKVPQKQ PHLLAREEIA RLFACCAHPA YRMALQTLYA TGLRVSEVGR LRVSDIDSAA DRMCVRVNAG KGGADRYSIL SPSLLALLRL YCQTYAPQRN PGKWLFANGT GERGVGIESL QRAYQAARHC AGITKSGGTH TLRHCFATHL LESGVDLYTI SRLLGHRHIS TTSRYLHLIS PQFRPPKSID PLDLLAGLPR L
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