Gene Bpro_4832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4832 
Symbol 
ID4012483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp5119761 
End bp5120636 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content67% 
IMG OID637944475 
Productphage integrase 
Protein accessionYP_551607 
Protein GI91790655 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02249] integron integrase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCT TGCGCCAACG CATGCTCGAC GCCATGACCG TACGCGGCCT GGCCGAGCGC 
ACCCAGGAAT GCTACGCCGA AGCCGTCTCG CGCATGGCGC GCCACTACCA CCGCAGCCCC
GATCTGCTCA GCCCCCAGGA GGTCGAGGCC TACTTGCTGC ACCTGGTCAA GGACCGCAAG
CTTTCCTACA GCAGCGTCAA CCACGCCGCC AGCGCCAGTC GCTTCCTGTT TGAAACCGTC
CTGGGGCGCA AGAGCGATGA GCACCTGCGC CCACCCATGG CCAAGGTGCC GCAAAAACAA
CCTCACCTGC TCGCCCGCGA AGAAATCGCC CGCCTGTTTG CCTGCTGCGC CCACCCGGCC
TACCGCATGG CGCTGCAAAC CCTCTACGCC ACGGGCCTGC GCGTCTCGGA AGTCGGCCGC
CTGCGTGTGA GCGACATCGA TAGCGCGGCC GACCGCATGT GCGTGCGCGT GAACGCCGGC
AAAGGCGGCG CCGACCGCTA CAGCATCCTG AGCCCAAGCC TGCTGGCGCT GCTGCGCTTG
TACTGTCAAA CCTACGCGCC GCAACGCAAC CCAGGCAAAT GGCTGTTCGC CAACGGCACG
GGCGAACGCG GCGTCGGCAT CGAGAGCCTG CAACGCGCCT ACCAGGCAGC CAGGCACTGC
GCCGGCATCA CCAAGAGCGG TGGCACCCAC ACCCTGCGCC ACTGTTTCGC CACCCACCTG
CTCGAAAGCG GCGTGGACCT GTACACCATC AGCCGCCTGC TGGGCCACCG CCACATCAGC
ACCACCAGCC GTTACCTGCA CCTGATCAGC CCGCAGTTCC GGCCACCCAA GAGCATCGAC
CCGCTGGATC TGCTGGCCGG CCTGCCGCGC CTGTAG
 
Protein sequence
MTPLRQRMLD AMTVRGLAER TQECYAEAVS RMARHYHRSP DLLSPQEVEA YLLHLVKDRK 
LSYSSVNHAA SASRFLFETV LGRKSDEHLR PPMAKVPQKQ PHLLAREEIA RLFACCAHPA
YRMALQTLYA TGLRVSEVGR LRVSDIDSAA DRMCVRVNAG KGGADRYSIL SPSLLALLRL
YCQTYAPQRN PGKWLFANGT GERGVGIESL QRAYQAARHC AGITKSGGTH TLRHCFATHL
LESGVDLYTI SRLLGHRHIS TTSRYLHLIS PQFRPPKSID PLDLLAGLPR L