| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4830 |
|---|
| Symbol | |
|---|
| ID | 4012481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 5118574 |
|---|
| End bp | 5119011 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637944473 |
|---|
| Product | ribonuclease H |
|---|
| Protein accession | YP_551605 |
|---|
| Protein GI | 91790653 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0328] Ribonuclease HI |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.935261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCCT GGGTTGTCTA CTGTGACGGC AGCGCCGTGC CCAACCCCGG TCGTATCGGC
CTTGGCGCAG TGTTTACCGA GCCTGATGGC ACGCGCCACA CTCTTTCGCA AGCGGCGCAT
GAGAACGGCT GCAACAATGA AGCGGAGCTA AGAGCGCTGC TGGCGACGCT TCGGGAACTG
AAACTACGTG GTGCGGGCAC GCTTCTCATA CACTGCGACA ACAGTGTGGT TGTCGAACAG
GTCGGCGGCG CCGCAGCAAA GCCGATAGCC CGGCTGGCCT CCTTGTTTGA TGAGGCGCGA
GCACTGCTCC ATTCGTTCGA CCAGGCAAAC CTGGTGTGGA TACCGCGCCA TCGCAACAGC
GAAGCCGATG CACTCGCTCG TGCTGCATTA GGGATTGCTG AAAAGCGCGT TGTCAAAATA
TCCAGGAAGC GGCGTTAG
|
|---|
| Protein sequence | MNPWVVYCDG SAVPNPGRIG LGAVFTEPDG TRHTLSQAAH ENGCNNEAEL RALLATLREL
KLRGAGTLLI HCDNSVVVEQ VGGAAAKPIA RLASLFDEAR ALLHSFDQAN LVWIPRHRNS
EADALARAAL GIAEKRVVKI SRKRR
|
|---|
| |