| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4826 |
|---|
| Symbol | |
|---|
| ID | 4012477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 5112963 |
|---|
| End bp | 5113961 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637944469 |
|---|
| Product | glyceraldehyde-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_551601 |
|---|
| Protein GI | 91790649 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.937498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA AAGTAGGCAT CAATGGTTTC GGCCGCATCG GCCGCAATGT GTTCCGTTCG
GCGGTGCAGA GCTTCAGCGA CATTGAAATC GTGGGCATCA ACGATTTGCT CGAGCCCGAG
TACCTGGCTT ACATGCTGCA GTACGACTCG GTGCATGGCC GCTTCAAGGG CGAGGTATCG
GTCGACGGCA ACACGCTGAT CGTCAACGGC AAGAAAATCC GCCTCACGCA GGAGCGTGAT
CCTGCCAACC TGAAATGGAA TGACGTCGGC GCGCAGGTCG TGATCGAATC CACCGGCCTC
TTCCTCGACA AGACCTCGGC TGAAAAACAC CTGGCCGCCG GCGCCAAAAA GGTCATCATT
TCCGCCCCCT CGAAAGACGA CACCCCCATG TTCGTCTTCG GCGTGAATGA CAAGACCTAC
AAGGGCGAAG CCGTCATCTC CAACGCCAGC TGCACCACCA ACTGCCTGGC GCCCGTCGCC
AAGGTGCTCA ACGACAAATG GGGCATCAAG CGCGGCCTGA TGACCACCGT GCACGCAGCG
ACTGCCACGC AGAAGACCGT GGACGGCCCG AGCAACAAGG ACTGGCGCGG CGGCCGCGGC
ATCCTGGAAA ACATCATCCC GTCGTCCACC GGTGCCGCCA AGGCCGTGGG TGTGGTGATT
CCCGAGCTCA ACAAAAAGCT CACCGGCATG TCCTTCCGTG TCCCCACCTC CGACGTCTCG
GTGGTGGACC TGACCTGCGA GCTGAGCAAG GAAGCCACGC TGAAGGAAAT CTGCGCCGAG
ATGAAAGCGC AAAGCGAAGG TGCGCTCAAG GGCGTGCTCG GCTACACCGA AGACAAGGTG
GTGGCCACCG ACTTCCGCGG CGATGCCCGC ACGTCGATTT TCGACGCCGA TGCCAGCATT
GCGCTCGACA GCACCTTCAT CAAGGTCGTG GCCTGGTATG ACAACGAATG GGGCTACTCG
AACAAGTGCC TGGAGATGGT GCGGGTGGTG GCGGGGTAA
|
|---|
| Protein sequence | MTIKVGINGF GRIGRNVFRS AVQSFSDIEI VGINDLLEPE YLAYMLQYDS VHGRFKGEVS
VDGNTLIVNG KKIRLTQERD PANLKWNDVG AQVVIESTGL FLDKTSAEKH LAAGAKKVII
SAPSKDDTPM FVFGVNDKTY KGEAVISNAS CTTNCLAPVA KVLNDKWGIK RGLMTTVHAA
TATQKTVDGP SNKDWRGGRG ILENIIPSST GAAKAVGVVI PELNKKLTGM SFRVPTSDVS
VVDLTCELSK EATLKEICAE MKAQSEGALK GVLGYTEDKV VATDFRGDAR TSIFDADASI
ALDSTFIKVV AWYDNEWGYS NKCLEMVRVV AG
|
|---|
| |