| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4825 |
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| Symbol | |
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| ID | 4012476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 5110298 |
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| End bp | 5112697 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637944468 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_551600 |
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| Protein GI | 91790648 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.976806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC AGCAGAACCG GCACATTTTG CTGGTCGACG ACATGCCCTC GATCCACGAG
GACTTCCGCA AGATCCTCGC GGCCAAGCCG GGGGCGCGCG ATCTGGACGA TGCCGAAGCG
GCCCTGTTTG GCCAGGCCGC TTCGCCGTCC GGTGAGGGCT TCGAACTGGA CTCGGCCTAC
CAGGGGCTCG AAGGGGTGGC CAGGGTCGAG GCCGCCGTTC AGGCCGGCCG TCCTTATGCC
ATGGCCTTCG TGGACATGCG CATGCCCCCG GGCCTGGACG GCGTGGAGAC GATAGCGCGG
CTCTGGCGCA TCGACCCACA GGTGCAGATC GTGATCTGCA CGGCCTACTC CGACTACCCC
TGGGAGGAAG TGCTGGCGCG ACTGGACGCG CAGGACCGCC TGCTCATCAT CAAGAAGCCG
TTCGACATGA TCGAGGTCAG CCAGCTGGCC AGGACGCTGA CCGCCAAATG GGAACTGACG
CGGCAGGCGA CGCTGCAGAT GGGCGGCCTG GAGAACGCCG TCAAGGAGCG GGCCAGGGCA
TTGCGCGCCA GCGAATCGCA GTTGCGCCAG ATCACGGACA CCGTGCCGGC CTTGATTGCC
TACGTCGACG CTGAACAGCG CTTTCAGTTT CACAACCTGG CCTATGAAGA AGGCTTTGGC
CTGAAGCGCG ATCAGATCCA CGGCAAGACC ATGCGCGAGA TGATGGGTGA TGCGCTTTAC
GAAAAAGAGC GCGGCAAGAT TGAAGAAGCC TTGTCGGGTT ACGCGGTGCA GTATGACCGC
GTGCAGAAAA CTGCGGATGG CCAGCTGCGC GACTACATCA TGCAGTACTT TCCGCGCTAT
GGCGAAGACC AGGATGAAGG CAAGGTGGTT GGACTTTTCT CGCTGGGCAC CGATGTGACC
GAGCTCAGAC GCATCGACCG CATGAAGAGT GAATTTGTCT CTACCGTCAG CCATGAGCTG
CGCACGCCGC TGACCTCCAT CCGCGGCTCG CTGGGCCTGA TTGCCGGTGG TGTTGCCGGA
GAGCTGCCGG CCATGGCCAA GAGCCTGGTT GGCATTGCCA GCAACAACTG CGAGCGCCTG
ATCAGGCTCA TCAACGACAT TCTTGACAGC GAAAAAATCG AGTCGGGCAA GATGCACTTT
GAGCTGCAGC AGGTGGAACT GCAGCCCCTG CTGGCGCAGG CCCTGGCGGC CAATGAAGGC
TTTGCAGGCC AGCACAACGT CAAGCTGGCC CTCGATGCCC CGGCAGACGC GGTGAGGGTC
AGCGTCGACA GCGACCGGCT CACCCAGGTC GTCACCAACC TGCTGTCCAA TGCCGTGAAA
TTTTCACCGC CGGCGTCCTG CGTACATATC AGGCTGCTGC GCAGCGGCGG GCGGGTCCGG
GTTGAAGTGG CCGACAGCGG CCCCGGCATC CTTGAAGAAT TTCGCAAACG CATCTTCCAG
AAATTCTCGC AAGCCGACAC ATCGGACACC CGGCAAAAGG GTGGCACGGG CCTGGGCCTG
AATATCTCGC GCGCCATCGT GGAGCAGATG GGCGGCAGCA TGGGGTTTAC CACCAAGGCC
GGTGTGGGGA CCGTTTTCCA CTTTGAACTG CCCGAAGCGA GCCCGCTGCC GGTTGAAGAC
CGGGACAGCG CCGCGCCGCG GCCCCGTATC CTGATTTGCG AAGATGACCC CGACATCGCG
CGCCTGCTCA ACCTGATGCT TGAAAAAGGC GGCTTTGATT CGGACATGGT GCACAGTGCT
GCGCAGGCGC TGGAACAGGT GGCGCGCCGG CCCTACGCCG CCATGACGGT CGACCTGAAC
CTGCCCGACC AGGACGGCGT CAGCCTGATC CGTGCGCTGC GCCGCGACAG CCGCACGCGG
GACCTGGCCA TTGTGGTGGT TTCGGCCAAT GCCAGAGAAG GTGAACTCGA ATTCAACAGC
CAACCGCTGG CGGTTTCGAC CTGGCTCGAG AAACCTATCG ACGAAAACCT GCTGATCCTC
AGTTTGCACC GCGCCATTGA CAACATGGCG GAAGGCAAGC CGCGCATTCT GCACGTCGAG
GACGACCTGG ACATCCAGCG CATTGCCGCT GCCATTGCCC AGAACTTCGC AACCTTTGAA
TTCGCCTGTA CCCTGCAGGA AGCGCGGGAC CAGCTGGCCA GCCATCATTA CGATCTGGTA
CTGCTCGACC TGACGCTCAA AGACGGTTCG GGCTGGGAAC TGCTAAGCAC CATCGAAGCG
CTGGACCCCG CACCGCCGGT CGTCGTGTTC TCTGCCAGCA AGCTGAACAT GATGGAAAGC
CAGCGCGTAG AAGCGGTGCT GGTAAAAGCA GATACCTCCA ACGAGGAGCT GATCAGGGTC
CTGCAGCGGG TGCTCGACGA CAGCTTGTGG GGAACGGTCG ATTCACCCCT GAGTACTTAG
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| Protein sequence | MTPQQNRHIL LVDDMPSIHE DFRKILAAKP GARDLDDAEA ALFGQAASPS GEGFELDSAY
QGLEGVARVE AAVQAGRPYA MAFVDMRMPP GLDGVETIAR LWRIDPQVQI VICTAYSDYP
WEEVLARLDA QDRLLIIKKP FDMIEVSQLA RTLTAKWELT RQATLQMGGL ENAVKERARA
LRASESQLRQ ITDTVPALIA YVDAEQRFQF HNLAYEEGFG LKRDQIHGKT MREMMGDALY
EKERGKIEEA LSGYAVQYDR VQKTADGQLR DYIMQYFPRY GEDQDEGKVV GLFSLGTDVT
ELRRIDRMKS EFVSTVSHEL RTPLTSIRGS LGLIAGGVAG ELPAMAKSLV GIASNNCERL
IRLINDILDS EKIESGKMHF ELQQVELQPL LAQALAANEG FAGQHNVKLA LDAPADAVRV
SVDSDRLTQV VTNLLSNAVK FSPPASCVHI RLLRSGGRVR VEVADSGPGI LEEFRKRIFQ
KFSQADTSDT RQKGGTGLGL NISRAIVEQM GGSMGFTTKA GVGTVFHFEL PEASPLPVED
RDSAAPRPRI LICEDDPDIA RLLNLMLEKG GFDSDMVHSA AQALEQVARR PYAAMTVDLN
LPDQDGVSLI RALRRDSRTR DLAIVVVSAN AREGELEFNS QPLAVSTWLE KPIDENLLIL
SLHRAIDNMA EGKPRILHVE DDLDIQRIAA AIAQNFATFE FACTLQEARD QLASHHYDLV
LLDLTLKDGS GWELLSTIEA LDPAPPVVVF SASKLNMMES QRVEAVLVKA DTSNEELIRV
LQRVLDDSLW GTVDSPLST
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