Gene Bpro_4823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4823 
Symbol 
ID4012513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp5105995 
End bp5109009 
Gene Length3015 bp 
Protein Length1004 aa 
Translation table11 
GC content62% 
IMG OID637944466 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_551598 
Protein GI91790646 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGAT TTGGCATCAG AGCCAAAGTC GCCGCGCTGA CTGGGTTTTG CCTTGTGTTT 
GCGCTGATCG CCACGCTGGT TCTTCTGTCG TGGATGCAGG TGAATGTCAA TCGCGACCGT
GAGGTTCTTG CCTCGTACAT GCGCCGGACG GAGTTGGCGA GAGTCCAGCA GGTGAATTTC
AGAAAGCAGC TGCAAGAATG GAAAAACATC CTGCTAAGAG GCCATCGCCC GGAGGATTTC
GAGAGCAACC GTCGATTGTT TTTGGAGCAG GAACGCCTGG TTCAGGAAAA CGGGAAAGCC
TTGACAGGCA TGCTCACCCA ACCCGCCCTC CGCGCCAGGG AGGTCGAATT TTTGAAAGCG
CATGAAGAAC TTGGCCGCCG CTATCGAAAC GCCCTGGGGG TCTTCGAGCA AAGCGGAAGA
CTGGATTTTC AGTCGGCGGA TCGCCTGGTT CGCGGGATGG ATCGCGTGCC GACCGACTTG
ATCGACGGGC TCGTGGCATC GACCGCCAAC GACTTTGAGC AATACAAGAC CTCCCATGCT
GCCGTCCTTC TCGATGAACA GCGTTACGCG CTAGGGGTGG CCCTCAGCGT GTTCCTGGGA
CTCATGCTGG CGAGCCATCT GCTTGCCAGG CGCATCACCC GGTCCATTCA TCACCTGACG
CAGACGGTAG CCAGAATTTC GGCCGAGAAA GACTATTCGC TCCGCGCGCA ACGAAGCAGC
CGCGATGAGC TTGGCCAGCT CACGGACGGG TTCAACGAAA TGCTCGCCCA AATTCAACAA
AGGAATGCCG CTTTGCAGCA GTCCCACGAC GATCTCGCGG AGCGGGTCGC CGAGCGCGAC
CACGCCGAAG AAGCGTTGCT GGTGTCGCAG GCGCTCTATC ACTCGCTGGT CGTGCAACTG
CCGGTCGGGA TTTTCCGCAA GGACGCCGCC GGGCGTTACG TTTTCGTCAA CCCCCGGTTT
TGCGAGCTCA AACACATGCC GGCGGATCAG ATTCTGGGCT GGACCGCGCC GGAGATTTGC
GTGCGCGAAT CACAGAACGC GACAAGCATG TGGCGCTCCG AGCTGGCCGT CCAGGGGACG
ATGCACCACG AGCAGATCAT GCGAAGCGGG CAGCCGGTCG CACTGGAGGA AACCTACACC
GGCCCGGACG GCCAGCCGCA GCACTGGCAG GTTGTCAAAT CGGCGGTGTT TGGGCCTGAC
CAGGCCATCA TTGGCAGCCA GGGCGTCGTC CTTGACATCA CCGAGCGCAT GCGGACGGAG
CGCGCCCTGC GCGAGAGCGA AGAACACTTT CGCTTTCTGA ACGATCTGGC CAAAGCGACG
CGCGCGCTGG CCGATCCGGA GCAGATCATG GCAGTGACGG CGCGCATGCT GGGCGAGCAC
CTGGGCGCCT CCCGCTGCGC CTACGCAGAC GTGGAAAAGG ACGGCGAACA GTTCGCCATC
CTGCACGACT ACACCGACGG CTGCATGAGC ACCGTGGGCA ATTACCAGCT TTCGCTCTTT
GGTGCGCGGC CCGTGGCCAA GCTCCAAAGC GGGCAGACAC TGGTCATTCG CAATGTGGAG
ACGGAGCTTT TGCCGGGCGA TGGCGCAGAG ATGTTCAATG CCATCGGCAT CCAGGCGATC
ATCACCTGCC CGCTGGTCAA GGATGGCATT CTTCGCGCCA TGATGGCCGT GCATCAGACG
ACACCGCGCG ACTGGACCCC GGGCGAAGTC GCCATCGTTC AGGAAGTCGT CGAACGTTGC
TGGGCGACGA TAGAGCGCAG GGCCGCGGAG GAAAACCTTC GCCAGAGCGA AGCCCTGCTA
CATATCGCCG GCCGCACCGC CCGGCTGGGC GGCTGGACCG TTGACCTGCC GGAAGTCCGC
ATCACCTGGT CGGATGAGAT GTGCGCCATC CACGACGTGG CACCCGGCAC CGTGCCTGAA
TTTGAGCAGG CCCTGAGTTC CTACGCCCCG CAGTCGCGTG AGCCCCTCCG CAAAGCCTAT
GAGGCCTGCG TCCGGGAGGG CACGCCCTTC GATCTCGAAG CGGAACTCAT CACCGCCAAA
GGACGGCATG TCTGGGTTCG CGCCATCGGC GAGGCCGAAC GCAATGCCGC CGGCACGATC
ACGCGGGTGC AAGGGGCGCT TCAGGACATC ACCGCACGCA GGCAGGCGGC GCTTGAGCTG
GAGCAGGCCC ACGCTCAACT GCTGGCAGCA TCCCTCAAGG CCGACATGGC GGAATTCGCC
ACCGGAATCC TGCACGACAT CGGCAATGTG CTCAACAGCG CCAATGTCGC GTCTTTTTGC
GTGGCTGACA GCCTCAGAAA ATCGAAGGCA GGCAATTTGT CCAAAGTGGT CGCGCTGCTG
CGGGAGCACG AGAACGATTT TGGCGACTTC TTCACCAACA ACCCCAAAGG CAGGCAGGTG
CCGGTTTACC TGGCGCAACT GGCCGGGCAA CTGGCCGAAG AGCAAGCCGG CGCGCTCAGG
GAACTGGCGC AACTGCAAAA GAACCTCGAG CACATCAAGG AGGTTGTGGC GAGGCAGCAG
GGGCTGGCCA AAACGCCCGG CGCGACGGAA GCCGTCAATG TGCCCGAGTT GGTGGAAGAC
GCCTTGCGGA TGAACCTGAG CGGGGCGGCG CAGCACGACA TTGAAGTCAT CAGGGATTTC
AAGGCCGTGC CGCCTGTCAG GGTGGAAAAA CACAAGGTGC TGCAAATCCT GGTCAACCTG
GTTCGCAATG CCAAACAATC CTGTGAAGTT TCAGGCCGCC ACGAGAAAAA ATTGGGCATC
CATACGACCC GTGACAATGA TCACATTCGA ATCGCGGTCA GTGACAACGG TGTGGGCATA
CCGCCCGAAA ACCTGGCGCG AATCTTTTCC CACGGCTTCA CCACCAAAAA GGACGGCCAC
GGCTTCGGGT TGCACAGCTG CGCACTGGCG GCCGCGGAGA TGGGTGGCAC CCTCACGACC
CACAGCGACG GGATCGGCCA GGGCGCGACC TTCACACTCG AACTTCCGAT CAACGCTGCG
CAGGACCAGC CATGA
 
Protein sequence
MNGFGIRAKV AALTGFCLVF ALIATLVLLS WMQVNVNRDR EVLASYMRRT ELARVQQVNF 
RKQLQEWKNI LLRGHRPEDF ESNRRLFLEQ ERLVQENGKA LTGMLTQPAL RAREVEFLKA
HEELGRRYRN ALGVFEQSGR LDFQSADRLV RGMDRVPTDL IDGLVASTAN DFEQYKTSHA
AVLLDEQRYA LGVALSVFLG LMLASHLLAR RITRSIHHLT QTVARISAEK DYSLRAQRSS
RDELGQLTDG FNEMLAQIQQ RNAALQQSHD DLAERVAERD HAEEALLVSQ ALYHSLVVQL
PVGIFRKDAA GRYVFVNPRF CELKHMPADQ ILGWTAPEIC VRESQNATSM WRSELAVQGT
MHHEQIMRSG QPVALEETYT GPDGQPQHWQ VVKSAVFGPD QAIIGSQGVV LDITERMRTE
RALRESEEHF RFLNDLAKAT RALADPEQIM AVTARMLGEH LGASRCAYAD VEKDGEQFAI
LHDYTDGCMS TVGNYQLSLF GARPVAKLQS GQTLVIRNVE TELLPGDGAE MFNAIGIQAI
ITCPLVKDGI LRAMMAVHQT TPRDWTPGEV AIVQEVVERC WATIERRAAE ENLRQSEALL
HIAGRTARLG GWTVDLPEVR ITWSDEMCAI HDVAPGTVPE FEQALSSYAP QSREPLRKAY
EACVREGTPF DLEAELITAK GRHVWVRAIG EAERNAAGTI TRVQGALQDI TARRQAALEL
EQAHAQLLAA SLKADMAEFA TGILHDIGNV LNSANVASFC VADSLRKSKA GNLSKVVALL
REHENDFGDF FTNNPKGRQV PVYLAQLAGQ LAEEQAGALR ELAQLQKNLE HIKEVVARQQ
GLAKTPGATE AVNVPELVED ALRMNLSGAA QHDIEVIRDF KAVPPVRVEK HKVLQILVNL
VRNAKQSCEV SGRHEKKLGI HTTRDNDHIR IAVSDNGVGI PPENLARIFS HGFTTKKDGH
GFGLHSCALA AAEMGGTLTT HSDGIGQGAT FTLELPINAA QDQP