Gene Bpro_4816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4816 
Symbol 
ID4012506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp5097082 
End bp5098536 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content68% 
IMG OID637944459 
ProductN-acyl-D-amino-acid deacylase 
Protein accessionYP_551591 
Protein GI91790639 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3653] N-acyl-D-aspartate/D-glutamate deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC ATTACGACCT ATTGATCCGC AACGCCGCCA TTGTTGACGG AACCGGCGCT 
GCCCGTTTCA GTGGCGATGT GGGCGTCCGC GGCGACCGCA TTGCGCGCAT TGGCGACCTG
CGCGGCGCCA GCGCCACCAC CGAGATCGAC GCCGCCGGCA TGGTGCTGGC CCCCGGCTTC
ATCGACGCCC ACACCCACGA CGACCGGCTC ATGCTCTCGG GCGGCGACAT GGCGCCCAAG
GTCAGCCAGG GCATCACGAC GGTGGTCGGC GGCAACTGCG GCGTATCGCT GGCCCCCATG
CCGCGGCCCA TTCCCGACCC GGTGACGCCG CCGCTGAACC TGCTGGACGG CACCGGCGCG
TGGTTTCGCT TCCCCGATTT CGCCAGCTAC CTGGACGCCT TGCGTGCCCA GCCCGCCGCC
ACCAACTGCG CCATGCTGGT GGGCCACACC ACGCTGCGCG TGGCCACCAT GGACGACCTG
ACGCAGCCGG CGAGCGCCAG TGAGATTGAC GCGATGCGCG CGCTGGTCGA GGAAGCCATG
CAGGCCGGCG CCATCGGCGT GTCGACCGGG CTGTTCTATG AGCCGTCGAT TGCCGCCCCG
ACCGAAGAGG TGATTGCCAT CTGCGAGCCG CTGCGCGCGC ACGGCGGCGT GTACTGCACC
CACATGCGCA ACGAGGGCGA CGACGTCATC AAGTCACTGA CCGAGACCTT CCGCATTGGC
CGCGAGGTGG ATGTGCCGGT GGTGATCTCG CACCACAAGG TGGTCGGCGT GAAGAACTAC
GGCCGATCCA CCGAGACGCT GAAGTTCATT GCCGACAACA TGGCGCTGCA ACCGATCTGC
CTGGACTGCT ATCCCTACCC GGCCTCGTCC ACCATTTTGT CGGCGCACCG CGCGGTCAAT
GCCACGCGCG TGACCGTGAC CTGGTCGGAG CCCATGCCGG AATGCGCCGG CATGGACCTG
GCCGACATCG TGGCCCAGCA GGGCGGCACG CTGGAGGAAG TGGTGGACCG CCTGACACCG
GCCGGCGCGA TCTACTACAT GATGGACGAC CGCGATGTGC AGCGCATCCT GCAGTTCGAC
CAGACCATGA TCGGCTCGGA CGGCCTGCCG CATGACGAGG CGCCCCATCC GCGCCTGTGG
GGCAGCTTTC CGCGCGTGCT GGGCCATTAC GGCCGCACGC TGGGCCTGTT CACCCTGGAA
ACAGCCATCC ACAAGATGAC GGGCCTGACC GCGAAGAACT TTGGCCTGGC GGGGCGGGGC
CTGGTCCAGG AGGGCGCTTT TGCCGACCTC ACGCTGCTCA ACCCGGACAC CGTGGACGAG
GGCGCCACCT TCAAGAAACC CATTGCCCCG GCCATCGGCA TTGACACCGT GCTGGTGAAC
GGCCAGATCG TCTGGCGCAA CGGCCAGCCC AGCGGCGCCC GGCCGGGCCG CGTGCTCAAA
CGCGAAACCG CATGA
 
Protein sequence
MSEHYDLLIR NAAIVDGTGA ARFSGDVGVR GDRIARIGDL RGASATTEID AAGMVLAPGF 
IDAHTHDDRL MLSGGDMAPK VSQGITTVVG GNCGVSLAPM PRPIPDPVTP PLNLLDGTGA
WFRFPDFASY LDALRAQPAA TNCAMLVGHT TLRVATMDDL TQPASASEID AMRALVEEAM
QAGAIGVSTG LFYEPSIAAP TEEVIAICEP LRAHGGVYCT HMRNEGDDVI KSLTETFRIG
REVDVPVVIS HHKVVGVKNY GRSTETLKFI ADNMALQPIC LDCYPYPASS TILSAHRAVN
ATRVTVTWSE PMPECAGMDL ADIVAQQGGT LEEVVDRLTP AGAIYYMMDD RDVQRILQFD
QTMIGSDGLP HDEAPHPRLW GSFPRVLGHY GRTLGLFTLE TAIHKMTGLT AKNFGLAGRG
LVQEGAFADL TLLNPDTVDE GATFKKPIAP AIGIDTVLVN GQIVWRNGQP SGARPGRVLK
RETA