| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4769 |
|---|
| Symbol | |
|---|
| ID | 4012537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 5054836 |
|---|
| End bp | 5055495 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637944414 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_551546 |
|---|
| Protein GI | 91790594 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG CGTCCAAGCC CCCTGCGGCA CGCAGTACCT ACCGCCACGG CGACCTGCGG
CGCGCGCTGC TGGAGGCGGG TGTGGCGCTG GCGCGCGCGG GCGGGCCCGA GGCCGTGGTG
CTGCGCGAAG CCACGCGGCG CGCCGGGGTG GCGCCCAACG CCGCCTACCG GCATTTCGAC
AGCCGGCAGG CCTTGCTCCG GGCCGTGCGT TCGGCTGCGC TGGCGGCCGT GGCCCGAGCG
ATGGAAGCCG AGCTGGCCGC GCTGCCGCAG GATTTGCCGC CGGCCGAATT CGCCCGCGCC
AATGTGCGCG CGGTGGGCAC GGGCTACCTG CGGTTTGCGC AGGCCGAAAC AGGCCTCTTT
CGCACGGCCT TTGCCGCATC CGACGACCTG AAGGAAAGAG CCCAGGGCCG CCCTGCCGAT
GCCGAGCGGT CCGGGCAGAG CGGCCTGGAC CCGTTCGAGC TGCTGGGCGC CGCGCTCGAC
AAACTGGTGG ACGCCGGCGT GCTGCCTCCG GAACGCCGCC CCGGCGCCGA GTTCCTGGCG
TGGTCGGCGG TGCACGGCCT GGCCATGCTG GTCATTGACG GCCCGCTAGG GCCCGTCATC
GGCCCGCAAA TGCAGCAAAT CGGCCAGCGC CTGCTGGACA TGGTGGAAAA AGGTTTGTAA
|
|---|
| Protein sequence | MTTASKPPAA RSTYRHGDLR RALLEAGVAL ARAGGPEAVV LREATRRAGV APNAAYRHFD
SRQALLRAVR SAALAAVARA MEAELAALPQ DLPPAEFARA NVRAVGTGYL RFAQAETGLF
RTAFAASDDL KERAQGRPAD AERSGQSGLD PFELLGAALD KLVDAGVLPP ERRPGAEFLA
WSAVHGLAML VIDGPLGPVI GPQMQQIGQR LLDMVEKGL
|
|---|
| |