| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4748 |
|---|
| Symbol | |
|---|
| ID | 4012555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 5035932 |
|---|
| End bp | 5037146 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637944393 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_551525 |
|---|
| Protein GI | 91790573 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.407896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.100227 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCAG CGATCGCTCA ACACCCGGCA CTAACGCTTG CCGATTACGC GTCTGCCGCG
AATGAGACAG ATCGCTTTGC AAAGGTACCT CAAAGGTACG ACCAACTTCG ATTCGGTTTT
TTTGGCGAGG TGGGTGGACT ACTCGCGGCA TTGAAGAAAG TCAATCGTGA CCAACTTAAA
GAATCGGAAA CCGAGGTGGC CGGCGAAGAG ATCGGAGATG CGCTGTGGTA CCTAGTCGCG
GTAACCCATA CTCAGGGTGT CAATCCAGAA CAACTTGGAA TCTCATGCCT TCGTACTTTA
CGGTCAAGAT TTTCTGAACG TGATCGCGAT AGCGTCGGAC CTATAAACTT CCGGCAGTTC
GATGGTATCG TCGCCCTTCA CGGACACGAG TTGGAAGCTA AGCGAACAGA GCTCCTCGGC
GAACTGGCTA ACGCAAGCGG TGAATTTGTT GGTCATAGCA TCGCCTCACA GCGAGGTATT
AACGAATCTT CACTTCCCGA TCTCTTCGGC GCTCTACTCG CTCTTCTTGC GCTGGTCTCC
GCCTCATTTA ACCTGAAACT TGAGGATGTG GCCCGCGATA ATCTGGTCAA AATTCTTGGC
CGTTGGCCGG GTCTTACCCC GCAATACGTC AGTCCCTTTG ATGAGCAATT CGACGCCCAT
GAACAGCTGC CTAGAGAGTT TCGCATCGAG TTCATAGAAC GGGGTGGGAT TGAAGCCGGT
CATGTTGTGC AGCGGCGCAA CGGCGTCTTT ATCGGAGATC GCTTGACCGA TAACAGCAAT
GAGCCAGACG ACTACCGCTT TCATGACGTG TTTCACCTCG CGTACGTCGC CCATCTCGGC
TGGTCCCCTG TCATCCGAGC GCTTTTTAAG ATGAAGCGCA AATCGAGGCC GGAGATAGAC
AAGAACGAAG ACGGCGCGCG GGCAATGATC ATTGAAGAAG GTATCGCCAC TTGGATTTTC
AATCACGCCA AGAAGCGCGG TTTCTATGAA GACATCCAGG TTGGCAAGCT TGACTACAGC
CTCCTGAAAC AGGTTCACAG CATGGTCAGC GGTTACGAAG TTCGCGAGTG TCCGATGTGG
CAATGGGAGC AAGCGATACT TGAGGGTTTC CGGGTGTTCC GTGAACTGCG GCATCCCGAT
CATCGCGGCG GCGTGGTAAT CGTAAATATG ATTGCCCATA AGCTGTCTTT TGAGCGTACA
GACAATACAA CATGA
|
|---|
| Protein sequence | MASAIAQHPA LTLADYASAA NETDRFAKVP QRYDQLRFGF FGEVGGLLAA LKKVNRDQLK
ESETEVAGEE IGDALWYLVA VTHTQGVNPE QLGISCLRTL RSRFSERDRD SVGPINFRQF
DGIVALHGHE LEAKRTELLG ELANASGEFV GHSIASQRGI NESSLPDLFG ALLALLALVS
ASFNLKLEDV ARDNLVKILG RWPGLTPQYV SPFDEQFDAH EQLPREFRIE FIERGGIEAG
HVVQRRNGVF IGDRLTDNSN EPDDYRFHDV FHLAYVAHLG WSPVIRALFK MKRKSRPEID
KNEDGARAMI IEEGIATWIF NHAKKRGFYE DIQVGKLDYS LLKQVHSMVS GYEVRECPMW
QWEQAILEGF RVFRELRHPD HRGGVVIVNM IAHKLSFERT DNTT
|
|---|
| |