| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4747 |
|---|
| Symbol | |
|---|
| ID | 4012554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 5035251 |
|---|
| End bp | 5035883 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637944392 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_551524 |
|---|
| Protein GI | 91790572 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.271154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.161964 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTGT TCTCATATGT CGTTGCGCGG GACTACGGCT TCGCGCCCAA CCCCTTCGGA
AAATCGTGCA CGCTAGCAAC ATGCAAACCG CAGATACGGC AGAGCGCCGC AAAAGGGGAT
TGGATCATTG GTCTTTCAGC GAGGCAGGAC AACCCGGATT TGAGCATCGT TTACGTCATG
AGGGTCGATA ACGTCGTTAC CTACAACGAG TACTGGAGCG ATGAGCAGTA CAGCTATAAA
AAGCCCAGCC GATCCGGCAG CTTGAAACAA GTATTCGGCG ACAACATCTA TCACCGAATC
GAACCCGGGG GATGGCAGCA GGTTGACTCT CACCATAGCC TAGAGGATGG ATCTCCTAAC
CCCCGCAATA TCGCAAACGA CACCCAATCC GAACACGTCT TGATCGGAGA CAGATTTGCT
TATTGGGGCA GTCGAGGCCC AAAGGTACCT TCCGCATTTT TGAACTTCAA TGACTGCACG
ATTCAGGTTG GTAGAGGGCA TAAGAACCGA TTTCCTTCCG AGTTCGTCGA CGAATTCGTT
GCGTGGTTCG AAGCACAGCA AGAGCAGGGA TACCTCGGAC CCCCATATCG CTGGGGAAGG
CAGAAAGCCA AGTGGTCCAA GCCTCCTACC TGA
|
|---|
| Protein sequence | MRLFSYVVAR DYGFAPNPFG KSCTLATCKP QIRQSAAKGD WIIGLSARQD NPDLSIVYVM
RVDNVVTYNE YWSDEQYSYK KPSRSGSLKQ VFGDNIYHRI EPGGWQQVDS HHSLEDGSPN
PRNIANDTQS EHVLIGDRFA YWGSRGPKVP SAFLNFNDCT IQVGRGHKNR FPSEFVDEFV
AWFEAQQEQG YLGPPYRWGR QKAKWSKPPT
|
|---|
| |