| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4738 |
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| Symbol | |
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| ID | 4012584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 5027642 |
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| End bp | 5028964 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637944383 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_551515 |
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| Protein GI | 91790563 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.66947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.832817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTT GGGGCATAGC CGCCTGGCTG ATGCTGGGCG GCTCCACCGT GCTGCTGTTC
ATCGGCATGC CGGTGGCGCT GACCTTCATC ACCATCAACA TCATTGGCGC CTGGCTCTAC
ATGGGCGGCG AGCCCGGCCT GGTGCAGCTG GCGCGCAGCA GCGTGAGCTC GGTCACGGCG
TTTTCATTGA CGCCAATTCC GCTGTTCGTG CTGATGGGCG AGATCCTGTT TCATACCGGC
CTGGCCATCA AGGTCATCGA AGGCGTCGAG CGGCTGATCA AGCATGTGCC CGGCCGCCTG
GCGGTGGTCG CCGTGGTGGC CGGCACGGTG TTTTCGGCCA TCTCGGGCTC CACCATTGCC
ACCACCGCGA TGCTCGGCTC GCTGATGCTG CCCATCATGC TGTCACGCGG CTACCACCCG
ACCCTGGCCA CCGGGCCCAT CATGGCCATT GGCGCGGTCG ACATGCTGAT ACCGCCCTCG
GCGCTGACCG TGCTGCTGGG CTCGCTGTCG GGCATCTCGA TTTCCAAGCT GCTGATTGGC
GGCGTGGTGC CCGGCGTGAT CCTGTCCGTC GCCTTTGTGC TGTGGATCGT CATTCGCGTC
ACCATCAGCC CGCAGCTGGC CCCCGTCGAC AAGGACGATG CGGTGCAGTA CCGCGGCTGG
GCGCGCTGGA GCCTGTTCTT TGGCTATGTG CTGCCCACGC TGTCGATCTT TGGCGTGGTG
GTGGGCGCGC TGGCCGCCGG CTGGGCCACG CCCACCGAGT GCGCCGCGCT GGGCGCCTTT
GCCACCATGC TGCTGGCGCT GTGCTACCGC GTCCTGACGC GGGACGCCGT GCTCAAGGCG
CTCAAGGGCA CGGCCGGCAT CTCGGGCATG ATTTTGTTCA TCATCCTGGG CGCCACCACG
TTTGCGCAAA TCCTGTCGTT CTCGGGCGCC AGCAACGGCC TGGTGCAGTT CATCACCGGC
CAGGGCCTGT CTACCGGCAT GATCGTGGTC GGCATGATGC TGATGCTGAT CTTCCTGGGC
ATCTTTGTCG ACCAGGTCAG CATGATGATG ATCACGCTGC CCATCTTCAT GCCGGTGGTG
CAGGCGCTGG GCATAGACCC GGTCTGGTTT GGCGTGATGT TTCTCATCTG CATGCAGCTG
GGCCTGCTGC TGCCGCCGCA CGGCCTGCTG CTGATGACCA TGCGCGGCGT GGCCCCGCCG
GCCGTCACCA TGGGCCATAT CTTCATGGCG GTGGTGCCCT ATGTGGTGAT GAGCCTGATA
CTGCTGGCCG CCGTGTTCTG GATTCCCGCG ATTGCGACCT GGCTGCCCCG GATGATTGGG
TAG
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| Protein sequence | MSGWGIAAWL MLGGSTVLLF IGMPVALTFI TINIIGAWLY MGGEPGLVQL ARSSVSSVTA
FSLTPIPLFV LMGEILFHTG LAIKVIEGVE RLIKHVPGRL AVVAVVAGTV FSAISGSTIA
TTAMLGSLML PIMLSRGYHP TLATGPIMAI GAVDMLIPPS ALTVLLGSLS GISISKLLIG
GVVPGVILSV AFVLWIVIRV TISPQLAPVD KDDAVQYRGW ARWSLFFGYV LPTLSIFGVV
VGALAAGWAT PTECAALGAF ATMLLALCYR VLTRDAVLKA LKGTAGISGM ILFIILGATT
FAQILSFSGA SNGLVQFITG QGLSTGMIVV GMMLMLIFLG IFVDQVSMMM ITLPIFMPVV
QALGIDPVWF GVMFLICMQL GLLLPPHGLL LMTMRGVAPP AVTMGHIFMA VVPYVVMSLI
LLAAVFWIPA IATWLPRMIG
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