Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4688 |
Symbol | |
ID | 4012651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4975519 |
End bp | 4976982 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637944337 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_551469 |
Protein GI | 91790517 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.125794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGGCCC ATTTGGCCCT GAGACTCTTC CAGCGCGAGC GGCGCAGCCT GTTTGGCGAG ATCCTCGACT GGATGCTCAC GCCGCTGCTG CTGCTGTGGC CGATCAGCCT GGCGCTGACC TGGCTGGTGG CGCAAAACAT TGCCGGCAAG CCTTTTGACC GCGCGCTGGA ATACAACGTG CAGGCGCTGG CCAAGCTGGT GGTGGTCAAG AACAACCAGG TGCAGTTCAA CCTGACCGGG CCCGCACGCG AAATCTTGCG CGCCGATGAC ACCGACCTGG TGTATTACCA GGTGCTCGGA ACGCACGGCG AATACCTGAG CGGCGAACAC GATTTGCCGC TGCCGCCGGA CGATGACAAG GCCATTGACG GCGAGGTGCG GCTGCGCGAG GGCTTCATTC AGGGCGAAGA GGTGCGTGTG GCCTACACCT GGATCAAGGT GGATGTGCAG GGCACCAGCA ACACCGTGTT GGTTCAGGTC GCCGAAACGC TGGAAAAACG CAAAACCCTG GCCACCGAAA TCGTCAAGGG CACGATGGTG CCGCAGTTCG TGACCCTGCC GCTGGCCGTG CTGCTGGTGT GGCTGGCGCT GGTACGCGGC ATCAAGCCGC TGGCGCAGCT TGAAAAGCGC ATCCGCGCGC GCAAGTCCGA CGACATGAGC CCGCTCGACG AAACCGCTGT GCCGGAGGAG GTGGCGCCGC TGGTGTCCTC CATCAACGAT TTGCTGAGCC GGCTCAAGGT CTCGCTCACC ACGCAAAAAC GCTTTCTGGC CGACGCAGCG CACCAGCTGA AAACGCCGCT GGCGGGCCTG CGCATGCAGG CCGACCTGGC GCAGCGCGAA ACCGATACCG ACGAGCTCAA AAAATCGCTC AAGCACATCG GCCGCGCCAG CATACGCGCC ACCCACACCG TCAACCAGCT GCTGGCGCTG GCGCGCGCCG AGACCACCGG CCGCAGCCTG GCCAAGCAGC ATGTGGACCT GGTGCTCATC GTCTCGGAAG TCATGGCCGA CTCGGTACCG CGCGCACTGG AAAAGCAGAT CGACCTCGGC TACGACGGCC CGCCCGCCGG CGAGCCCTCC TTCCAGCTCG AAGGCAACCC GACGCTGCTC AAGGAGCTGG TGCGTAACCT GCTGGACAAC GCCATCAACT ACACGCCCGA GAAAGGCCAG GTCACGGTGC GGCTGATGAC CGACCGCTTC AGCGGCGTGC GGGTGCTGCT GGTGGAAGAC TCGGGGCCCG GCATTCCGGA ATCGGAACGC GAGCTGGTGT TCCAGCCCTT CTACCGCGCG CTTGGCACCA ACGTGGATGG CTCGGGCCTC GGGCTGGCGA TCGTGCTGGA GATCGCCAAG CAGCATGACG CCACCATCAC CATTGAGGAC GCGGCGCTCC CAGGCCACCC GCAGTCACCG GGCACGCGCG TCGCCGTGCG CTTTGTCGGC ATGGACCTGC CCGAGGCCGG CTGA
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Protein sequence | MGAHLALRLF QRERRSLFGE ILDWMLTPLL LLWPISLALT WLVAQNIAGK PFDRALEYNV QALAKLVVVK NNQVQFNLTG PAREILRADD TDLVYYQVLG THGEYLSGEH DLPLPPDDDK AIDGEVRLRE GFIQGEEVRV AYTWIKVDVQ GTSNTVLVQV AETLEKRKTL ATEIVKGTMV PQFVTLPLAV LLVWLALVRG IKPLAQLEKR IRARKSDDMS PLDETAVPEE VAPLVSSIND LLSRLKVSLT TQKRFLADAA HQLKTPLAGL RMQADLAQRE TDTDELKKSL KHIGRASIRA THTVNQLLAL ARAETTGRSL AKQHVDLVLI VSEVMADSVP RALEKQIDLG YDGPPAGEPS FQLEGNPTLL KELVRNLLDN AINYTPEKGQ VTVRLMTDRF SGVRVLLVED SGPGIPESER ELVFQPFYRA LGTNVDGSGL GLAIVLEIAK QHDATITIED AALPGHPQSP GTRVAVRFVG MDLPEAG
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